CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 8
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	plastid, secretory
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	plastid
Predotar:	secretory
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX78074	Canola	plastid	27.84	38.85
CDX73649	Canola	plastid	26.29	37.23
AT3G52230.1	Thale cress	cytosol	23.2	31.03
GSMUA_Achr6P17130_001	Banana	cytosol	9.79	27.54
Solyc11g007680.1.1	Tomato	plastid	19.07	26.81
PGSC0003DMT400070341	Potato	cytosol	19.07	26.62
VIT_13s0074g00230.t01	Wine grape	cytosol	15.98	23.48
GSMUA_Achr6P07550_001	Banana	nucleus	9.79	19.39
KRG92059	Soybean	endoplasmic reticulum	12.89	17.61
KRH34716	Soybean	cytosol	11.34	15.83
KRH07959	Soybean	nucleus	8.76	15.45

Protein Annotations

EnsemblPlants:CDX95325

EnsemblPlantsGene:GSBRNA2T00100992001

ProteinID:CDX95325

ProteinID:CDX95325.1

UniParc:UPI0004EC9521

MapMan:35.2

Description

BnaC04g28330D

Coordinates

chrLK031888:+:231183..232925

Molecular Weight (calculated)

21736.8 Da

IEP (calculated)

8.077

GRAVY (calculated)

-0.340

Length

194 amino acids

Sequence
(BLAST)

001: MASTLFLPLK LPSFISNFLK PKSLASVSDS DGPKPTGVVS SSYKESQNSS VSFPYNPAKN MEPLKFEAEG CSRRTSNSFV LWQREFPLSV YNLNILLEGL
101: CKNLEYGKTV ILLREKNWNW SIAINKKVKA SFAAEVKVCL ANTVSHWKDQ PHKGSMVLAH LELWILDPPA HSADEEAEVG RRSSSDYFSD DLNH

Best Arabidopsis Sequence Match ( AT3G52230.1 )
(BLAST)

001: MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED

Arabidopsis Description

AT3g52230/F4F15_340 [Source:UniProtKB/TrEMBL;Acc:Q9SUY2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.