Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P17130_001 | Banana | cytosol | 48.98 | 69.57 |
| VIT_13s0074g00230.t01 | Wine grape | cytosol | 34.69 | 25.76 |
| CDX73649 | Canola | plastid | 34.69 | 24.82 |
| Bra006913.1-P | Field mustard | cytosol, plastid | 31.63 | 22.3 |
| CDX78074 | Canola | plastid | 31.63 | 22.3 |
| Solyc11g007680.1.1 | Tomato | plastid | 29.59 | 21.01 |
| PGSC0003DMT400070341 | Potato | cytosol | 29.59 | 20.86 |
| AT3G52230.1 | Thale cress | cytosol | 30.61 | 20.69 |
| KRH34716 | Soybean | cytosol | 28.57 | 20.14 |
| KRG92059 | Soybean | endoplasmic reticulum | 26.53 | 18.31 |
| KRH07959 | Soybean | nucleus | 14.29 | 12.73 |
| CDX95325 | Canola | plastid | 19.39 | 9.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P07550_001 | EnsemblPlants:GSMUA_Achr6T07550_001 | EnsemblPlantsGene:GSMUA_Achr6G07550_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36374 | SEG:seg | TMHMM:TMhelix | UniParc:UPI000295FB74 | UniProt:M0T504 | MapMan:35.2 |
Description
Hypothetical protein [Source:GMGC_GENE;Acc:GSMUA_Achr6G07550_001]
Coordinates
chr6:-:5133067..5134983
Molecular Weight (calculated)
11497.5 Da
IEP (calculated)
5.210
GRAVY (calculated)
-0.945
Length
98 amino acids
Sequence
(BLAST)
(BLAST)
1: MEEVESEQQA VAARPAREEE RHGTMNPSPT MIVTFPDAAR RRAQSFPPPL TLEGEESTED MSHHNMWQVY ALGGFMILRW IWARWRERRD RGKSNEDL
001: MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
Arabidopsis Description
AT3g52230/F4F15_340 [Source:UniProtKB/TrEMBL;Acc:Q9SUY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.