CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 4
cytosol 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92059	Soybean	endoplasmic reticulum	70.91	54.93
KRH34716	Soybean	cytosol	69.09	54.68
GSMUA_Achr6P17130_001	Banana	cytosol	10.91	17.39
CDX73649	Canola	plastid	20.91	16.79
Solyc11g007680.1.1	Tomato	plastid	20.91	16.67
PGSC0003DMT400070341	Potato	cytosol	20.91	16.55
Bra006913.1-P	Field mustard	cytosol, plastid	20.0	15.83
CDX78074	Canola	plastid	20.0	15.83
GSMUA_Achr6P07550_001	Banana	nucleus	12.73	14.29
VIT_13s0074g00230.t01	Wine grape	cytosol	16.36	13.64
AT3G52230.1	Thale cress	cytosol	17.27	13.1
CDX95325	Canola	plastid	15.45	8.76

Protein Annotations

EMBL:ACUP02010128	EnsemblPlants:KRH07959	EnsemblPlantsGene:GLYMA_16G121100	EntrezGene:100788736	GO:GO:0006139	GO:GO:0006355
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	PANTHER:PTHR36374	ProteinID:KRH07959
ProteinID:KRH07959.1	SEG:seg	UniParc:UPI0002952F42	UniProt:K7MGV0	MapMan:35.2	:

Description

hypothetical protein

Coordinates

chr16:-:26938548..26939161

Molecular Weight (calculated)

12089.5 Da

IEP (calculated)

5.022

GRAVY (calculated)

-0.305

Length

110 amino acids

Sequence
(BLAST)

001: MSRSGDETAV TEEAQPKESL PNLFSLFPKI NFQLPFLPPK PQEPNPEAQA QQELPKPSRV QFPKTQVAMV ASLPLLAEPN ADHSPAAKTT NPLILWQSIP
101: TFIGIYLTGI

Best Arabidopsis Sequence Match ( AT3G11920.1 )
(BLAST)

001: MRFEESKNNC QNPRKSEKVT NGKSYTISSD IVSPPYSNSN PISDHVHPAT PIPEAVSQSP MKEISIDDPY LPPHPQLPKL EPPRGRRVSL EELLHPKEKF
101: TGDLMKFIRQ SGNAISKRIS VLLENDDDDD SIDDVTEFKI SGVKVLVKMK NEEEIKGRIT FFSRSNCRDS TAVRLFLRER GFDFSEINID VYSSREKELV
201: ERTGSSQVPQ IFFNEKHFGG LMALNSLRNS GEFDRRVKEF LKEKCCGDAP LPVMYGFDEE SNNKDVVVVV DEMMRFVRVL RQKLPIKDRL MKMKIVKNCF
301: SGAEMVEILI DYLDCGRKKA VEIGKRLAEK HFIHHVFGEN EFEDGNHYYR FLEHEPFVSK CYNFRGSTND MEPQSAAIVG QKLFKIMTAI LESYSSNDHT
401: SVDYMRISQS EEFRRYLNLA QDFHRLNLVE LSTEEKLAFF LNLYNAMVIH ALISIGRPEG LIARRSFFTD FQYVVGGYSY SLSSIRNDIL RRGRKPSYPF
501: IRPPFNNGKT RHELGLLKLN PLVHFGLCDG TKSSPVVRFF TPQGVEAELK RAAREFFQNG GIEVVLDKRT IHLSRIIKWY KEDFSEEKKM LKWIMGYIDS
601: NDAGLLTHLL GDGGGSFNIV YQDYDWSTNN

Arabidopsis Description

F26K24.21 protein [Source:UniProtKB/TrEMBL;Acc:Q9SF07]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.