Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG92059 | Soybean | endoplasmic reticulum | 84.17 | 82.39 |
| KRH07959 | Soybean | nucleus | 54.68 | 69.09 |
| GSMUA_Achr6P17130_001 | Banana | cytosol | 17.27 | 34.78 |
| GSMUA_Achr6P07550_001 | Banana | nucleus | 20.14 | 28.57 |
| CDX73649 | Canola | plastid | 24.46 | 24.82 |
| VIT_13s0074g00230.t01 | Wine grape | cytosol | 23.02 | 24.24 |
| PGSC0003DMT400070341 | Potato | cytosol | 23.74 | 23.74 |
| Bra006913.1-P | Field mustard | cytosol, plastid | 23.02 | 23.02 |
| CDX78074 | Canola | plastid | 23.02 | 23.02 |
| AT3G52230.1 | Thale cress | cytosol | 23.74 | 22.76 |
| Solyc11g007680.1.1 | Tomato | plastid | 22.3 | 22.46 |
| CDX95325 | Canola | plastid | 15.83 | 11.34 |
Protein Annotations
| EMBL:ACUP02006620 | EnsemblPlants:KRH34716 | EnsemblPlantsGene:GLYMA_10G201500 | EntrezGene:100791948 | GO:GO:0005575 | GO:GO:0016020 |
| GO:GO:0016021 | PANTHER:PTHR36374 | ProteinID:KRH34716 | ProteinID:KRH34716.1 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000233D676 | UniProt:I1LCQ6 | MapMan:35.2 | : | : | : |
Description
hypothetical protein
Coordinates
chr10:-:43264386..43266891
Molecular Weight (calculated)
15344.9 Da
IEP (calculated)
6.539
GRAVY (calculated)
-0.771
Length
139 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRNSDEPAM TEEAPTKQSL ANIFSLFRKI NFQLPFLPPK PEEPKLEAQA QQEGPKPGRV QFPKSQVALI ASSPLQAEPD ADHSPAAKTT NPLILWQIYA
101: IGAIAISSWV WARWNERKGR GGSPSDERGE GRHSDDGNQ
101: IGAIAISSWV WARWNERKGR GGSPSDERGE GRHSDDGNQ
001: MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
Arabidopsis Description
AT3g52230/F4F15_340 [Source:UniProtKB/TrEMBL;Acc:Q9SUY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.