Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 1
- cytosol 2
- nucleus 2
- mitochondrion 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr6P07550_001 | Banana | nucleus | 69.57 | 48.98 |
| VIT_13s0074g00230.t01 | Wine grape | cytosol | 50.72 | 26.52 |
| CDX73649 | Canola | plastid | 44.93 | 22.63 |
| AT3G52230.1 | Thale cress | cytosol | 46.38 | 22.07 |
| Bra006913.1-P | Field mustard | cytosol, plastid | 43.48 | 21.58 |
| CDX78074 | Canola | plastid | 43.48 | 21.58 |
| Solyc11g007680.1.1 | Tomato | plastid | 42.03 | 21.01 |
| PGSC0003DMT400070341 | Potato | cytosol | 40.58 | 20.14 |
| KRH34716 | Soybean | cytosol | 34.78 | 17.27 |
| KRG92059 | Soybean | endoplasmic reticulum | 34.78 | 16.9 |
| KRH07959 | Soybean | nucleus | 17.39 | 10.91 |
| CDX95325 | Canola | plastid | 27.54 | 9.79 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr6P17130_001 | EnsemblPlants:GSMUA_Achr6T17130_001 | EnsemblPlantsGene:GSMUA_Achr6G17130_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| PANTHER:PTHR36374 | TMHMM:TMhelix | UniParc:UPI0002967E70 | UniProt:M0T7R1 | MapMan:35.2 | : |
Description
chloroplast outer envelope 24 kD protein, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr6G17130_001]
Coordinates
chr6:+:11531873..11535620
Molecular Weight (calculated)
8120.5 Da
IEP (calculated)
6.635
GRAVY (calculated)
-0.917
Length
69 amino acids
Sequence
(BLAST)
(BLAST)
1: MVTFPDAARR RAQSFPPPLK LECEDSTEDM NPRNLWQVYA LGGFMISKWI WARWRERNNR GTSDEDSST
001: MAEEAQVDRS NGSDSSSPPI KLPPFITNLF AFLQPKPPPA TIDANAPKPT GEKEPLKSTY ETVTFPYNPP KSAEPIKFEA EPSSGRTSNS VILWQVYALG
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
101: GFLVLKWAWA RWNERNERSD KKEATGDDDQ KDDDEDDQSS DGHED
Arabidopsis Description
AT3g52230/F4F15_340 [Source:UniProtKB/TrEMBL;Acc:Q9SUY2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.