Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- peroxisome 1
- mitochondrion 4
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra004287.1-P | Field mustard | mitochondrion | 99.46 | 99.46 |
| CDY01893 | Canola | mitochondrion | 55.83 | 83.06 |
| AT1G68180.1 | Thale cress | mitochondrion | 42.01 | 65.96 |
| CDY07397 | Canola | cytosol | 21.68 | 64.52 |
| CDX81498 | Canola | mitochondrion | 43.09 | 63.6 |
| CDY04206 | Canola | cytosol | 25.2 | 61.59 |
| CDY12699 | Canola | mitochondrion | 43.9 | 44.26 |
| CDY04094 | Canola | cytosol | 8.67 | 22.86 |
| CDX70951 | Canola | cytosol | 13.28 | 15.91 |
| CDX88834 | Canola | cytosol | 12.74 | 15.16 |
| CDX87889 | Canola | cytosol | 8.67 | 13.06 |
Protein Annotations
| EnsemblPlants:CDX96042 | EnsemblPlantsGene:GSBRNA2T00102079001 | Gene3D:3.30.40.10 | GO:A0A078E4N5 | InterPro:IPR001841 | InterPro:IPR013083 |
| InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD | PANTHER:PTHR44290 | PFAM:PF13639 | PFscan:PS50089 | ProteinID:CDX96042 |
| ProteinID:CDX96042.1 | SEG:seg | SMART:SM00184 | SUPFAM:SSF57850 | UniParc:UPI0004EF057F | MapMan:35.1 |
Description
BnaA07g26890D
Coordinates
chrLK031892:-:766450..768435
Molecular Weight (calculated)
42562.9 Da
IEP (calculated)
5.854
GRAVY (calculated)
-0.593
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MASNPYRPRV IVNGTRRTRT FHYFYCRHCS RTIRLRNYGL YGSLCPFCSR EINLHDELDI MRPNRSFWDT DTDWITLHLI NSSRSNRFNH ELVNDTDDDF
101: VDAMPSERVG PPPASLSAIE DLKTVTIAEE DLAKEKVCAI CKEEFEVGEE GKELKCLHLY HTSCIVSWLN IHNTCPICRF EVRLGVSGSD IDGGGSRHVD
201: HDRSNRSSGP RVCSLWPLRV MFDWERDKSL SVTEQDGPSP LELPKQSEER LVHLSQTGKY LIVDFSHLSS SSTLGDSYWE CKRPFNKNNQ LWDQNLQDIG
301: VCEDTICDDH DFHIPDIDLT FRNFEELFGA DYDLVADDNN ILFKGTLHQP ICTRQNAISR LKEKKRARA
101: VDAMPSERVG PPPASLSAIE DLKTVTIAEE DLAKEKVCAI CKEEFEVGEE GKELKCLHLY HTSCIVSWLN IHNTCPICRF EVRLGVSGSD IDGGGSRHVD
201: HDRSNRSSGP RVCSLWPLRV MFDWERDKSL SVTEQDGPSP LELPKQSEER LVHLSQTGKY LIVDFSHLSS SSTLGDSYWE CKRPFNKNNQ LWDQNLQDIG
301: VCEDTICDDH DFHIPDIDLT FRNFEELFGA DYDLVADDNN ILFKGTLHQP ICTRQNAISR LKEKKRARA
001: MTSAYRPRVI VNGTRRTRTF HYFYCRHCSR TIRLRSFGLY GPICPFCSRE INLHDELDIM RPSRPYWDSD TDWITLHLIN EPRSNRFNHD DLVYNTDEEF
101: ADVMPSVQIG PPPASQSAIE AVRTVIITDE DLVKEKVCAI CKEEFEVGEE GKELKCLHLY HSSCIVSWLN IHNTCPICRF EVNLGVSESN VDEGGSYNID
201: NDRSNRFRTR VCSLWPLRMM IDWVHNLIDI RITNS
101: ADVMPSVQIG PPPASQSAIE AVRTVIITDE DLVKEKVCAI CKEEFEVGEE GKELKCLHLY HSSCIVSWLN IHNTCPICRF EVNLGVSESN VDEGGSYNID
201: NDRSNRFRTR VCSLWPLRMM IDWVHNLIDI RITNS
Arabidopsis Description
RING/U-box superfamily protein [Source:TAIR;Acc:AT1G68180]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.