Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 5
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY43301 | Canola | plastid | 53.64 | 20.27 |
| CDY17450 | Canola | plastid | 53.64 | 15.95 |
| CDY15081 | Canola | plastid | 51.82 | 14.21 |
| CDY66247 | Canola | plastid | 50.91 | 13.93 |
| CDX94822 | Canola | plastid | 6.36 | 4.02 |
| CDX86321 | Canola | plastid | 14.55 | 3.21 |
| CDX85318 | Canola | plastid | 13.64 | 2.88 |
| CDY00860 | Canola | cytosol | 1.82 | 2.11 |
Protein Annotations
| EnsemblPlants:CDY00859 | EnsemblPlantsGene:GSBRNA2T00110804001 | PANTHER:PTHR22854 | PANTHER:PTHR22854:SF10 | ProteinID:CDY00859 | ProteinID:CDY00859.1 |
| SEG:seg | UniParc:UPI0004EDD618 | MapMan:35.1 | : | : | : |
Description
BnaCnng00590D
Coordinates
chrLK031922:+:715159..715678
Molecular Weight (calculated)
12210.7 Da
IEP (calculated)
10.907
GRAVY (calculated)
-0.369
Length
110 amino acids
Sequence
(BLAST)
(BLAST)
001: MEGHVLVQRL PARLVSPSLY QRIGYVSIRR SVSGLAMDRR INSRAPSEFA ISAQQESLGV ASSSSSVEND VRIKEWKVDM YQNEVAISQG IRIRRKPPSK
101: APLGYSGHLS
101: APLGYSGHLS
001: MEGLVPVQRL PIKVASPSLY RCNNSVSIRR SISGFAMDRK INFRAPSQFS IRAQQSDLKE SLAVSSSSVE DKGNVLRIKE WEVEMYQEEL AISQGIRIRR
101: KPPSKAPLGY SGPFELRLHN NDADSPRNIL EEITWYKDVE VSRMKELNPL DVLKKAVEDA PPTRDFVGAL RMAHKRTGFP GLIAEVKKAS PSRGILKENF
201: DPVEIAQAYE KGGAACLSVL TDQKYFQGGF ENLEAIRSAG VKCPLLCKEF VVDPWQIYYA RTKGADAVLL IAAVLADLEI TFLLKICKKL SLAALVEVHD
301: EREMGRVLGI EGIELVGINN RSLETFEVDI SNTKKLLEGE HGRQIRERDM IVVGESGLFT PDDIAYVQAA GVKAVLVGES IVKQNDPEKG IAGLFGRNIS
401: HT
101: KPPSKAPLGY SGPFELRLHN NDADSPRNIL EEITWYKDVE VSRMKELNPL DVLKKAVEDA PPTRDFVGAL RMAHKRTGFP GLIAEVKKAS PSRGILKENF
201: DPVEIAQAYE KGGAACLSVL TDQKYFQGGF ENLEAIRSAG VKCPLLCKEF VVDPWQIYYA RTKGADAVLL IAAVLADLEI TFLLKICKKL SLAALVEVHD
301: EREMGRVLGI EGIELVGINN RSLETFEVDI SNTKKLLEGE HGRQIRERDM IVVGESGLFT PDDIAYVQAA GVKAVLVGES IVKQNDPEKG IAGLFGRNIS
401: HT
Arabidopsis Description
IGPSIndole-3-glycerol phosphate synthase, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:P49572]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.