Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 5
- nucleus 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY51400 | Canola | mitochondrion | 82.91 | 78.23 |
| CDY33089 | Canola | mitochondrion, plastid | 81.2 | 76.61 |
| CDY02481 | Canola | mitochondrion | 80.34 | 75.81 |
| CDY56627 | Canola | mitochondrion | 80.34 | 75.81 |
| CDY39092 | Canola | plastid | 61.54 | 61.02 |
| CDY33252 | Canola | plastid | 60.68 | 60.17 |
| VIT_09s0002g01060.t01 | Wine grape | cytosol, plastid | 42.73 | 37.88 |
| PGSC0003DMT400012536 | Potato | plastid | 39.32 | 36.51 |
| PGSC0003DMT400011173 | Potato | plastid | 33.33 | 36.11 |
| KRH06198 | Soybean | cytosol, plastid | 40.17 | 35.88 |
| KRH47616 | Soybean | cytosol | 39.32 | 35.66 |
| Solyc06g062930.1.1 | Tomato | nucleus, plastid | 35.9 | 33.33 |
| PGSC0003DMT400058990 | Potato | plastid | 29.06 | 26.77 |
Protein Annotations
| EnsemblPlants:CDY26144 | EnsemblPlantsGene:GSBRNA2T00034796001 | ncoils:Coil | PANTHER:PTHR34788 | PANTHER:PTHR34788:SF1 | ProteinID:CDY26144 |
| ProteinID:CDY26144.1 | SEG:seg | UniParc:UPI0004EB11E8 | UniProt:A0A078GLM8 | MapMan:35.2 | : |
Description
BnaC06g10520DBnaC06g10520D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GLM8]
Coordinates
chrLK032185:-:561683..562036
Molecular Weight (calculated)
13742.3 Da
IEP (calculated)
12.243
GRAVY (calculated)
-0.303
Length
117 amino acids
Sequence
(BLAST)
(BLAST)
001: MDPRVFATSV RWPRSRRKIH IRRRKSQVVR LGVPRGGFSL KKMVRKMKLR WLRLHYVRLV KKIKGFYRNL VKEFVEAGAE LEAIQKRMTV EAAAFAVPGL
101: GLSFSSLSVH ERGRYYV
101: GLSFSSLSVH ERGRYYV
001: MDQRIAAIPV FRWSRSRRKI HIRRRKSQVV RLGGKNSAVS RGGFSLKKMV RRMKLRWLKL HYVRVVKKIK VFYRNLVKEF VDAGAELEAI QQRMAVEAAA
101: FAVPGLGLSF SSFSVHDRAR YFLV
101: FAVPGLGLSF SSFSVHDRAR YFLV
Arabidopsis Description
F15I1.22 [Source:UniProtKB/TrEMBL;Acc:Q9SYH0]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.