Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 6
- mitochondrion 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra021528.1-P | Field mustard | plastid | 96.61 | 96.61 |
| CDY39092 | Canola | plastid | 96.61 | 96.61 |
| AT3G14060.1 | Thale cress | plastid | 77.97 | 73.6 |
| CDY26144 | Canola | mitochondrion | 60.17 | 60.68 |
| CDY02481 | Canola | mitochondrion | 61.02 | 58.06 |
| CDY33089 | Canola | mitochondrion, plastid | 61.02 | 58.06 |
| CDY51400 | Canola | mitochondrion | 61.02 | 58.06 |
| CDY56627 | Canola | mitochondrion | 58.47 | 55.65 |
| PGSC0003DMT400012536 | Potato | plastid | 38.14 | 35.71 |
| VIT_09s0002g01060.t01 | Wine grape | cytosol, plastid | 39.83 | 35.61 |
| KRH06198 | Soybean | cytosol, plastid | 38.14 | 34.35 |
| PGSC0003DMT400011173 | Potato | plastid | 31.36 | 34.26 |
| KRH47616 | Soybean | cytosol | 37.29 | 34.11 |
| Solyc06g062930.1.1 | Tomato | nucleus, plastid | 33.9 | 31.75 |
| PGSC0003DMT400058990 | Potato | plastid | 30.51 | 28.35 |
Protein Annotations
| EnsemblPlants:CDY33252 | EnsemblPlantsGene:GSBRNA2T00054016001 | PANTHER:PTHR34788 | PANTHER:PTHR34788:SF1 | ProteinID:CDY33252 | ProteinID:CDY33252.1 |
| UniParc:UPI0004EECE83 | UniProt:A0A078H755 | MapMan:35.2 | : | : | : |
Description
BnaC01g37250DBnaC01g37250D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H755]
Coordinates
chrLK032309:+:369677..370067
Molecular Weight (calculated)
13638.9 Da
IEP (calculated)
12.205
GRAVY (calculated)
-0.286
Length
118 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTHSFITSA FRWPSSRRKV YLRRRKPQVV RLGGRNSGPR GRFSLKRVAR KMKFKWLRLY YVKLVKMIKG YYRNVAQEFA DAGAATIQQR MTVETAAFAA
101: PGLGLSFCPV SGQRFFLV
101: PGLGLSFCPV SGQRFFLV
001: MDPHLVITAA SSAFRWPSSR RKIYLRRRKP QVVRLGGKNS TPRGSFSLKK VVTRMRLKWL RLYYVRLVKK IKAYYRTIVK EFEEAGAATI QQRMTVETAA
101: FAAPGLGLSF CPMSGYVDQP RFFLV
101: FAAPGLGLSF CPMSGYVDQP RFFLV
Arabidopsis Description
At3g14060 [Source:UniProtKB/TrEMBL;Acc:Q9LVJ2]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.