Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030740.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDX93538 | Canola | cytosol | 87.79 | 89.15 |
| CDX95034 | Canola | cytosol | 87.02 | 88.37 |
| CDY66241 | Canola | cytosol | 96.18 | 80.77 |
| Os03t0628900-01 | Rice | cytosol | 74.05 | 76.98 |
| VIT_14s0081g00080.t01 | Wine grape | cytosol | 74.05 | 76.98 |
| Solyc01g097300.2.1 | Tomato | cytosol | 74.81 | 76.56 |
| PGSC0003DMT400050100 | Potato | cytosol | 74.05 | 75.78 |
| KRG92689 | Soybean | cytosol | 72.52 | 75.4 |
| KRH34096 | Soybean | cytosol | 72.52 | 75.4 |
| EER91208 | Sorghum | cytosol | 71.76 | 74.6 |
| Zm00001d013708_P001 | Maize | cytosol | 70.23 | 73.02 |
| TraesCS5D01G388600.1 | Wheat | cytosol | 69.47 | 72.22 |
| GSMUA_Achr4P17760_001 | Banana | cytosol | 74.81 | 61.64 |
| HORVU5Hr1G093710.1 | Barley | cytosol, plastid, vacuole | 25.19 | 16.67 |
Protein Annotations
| MapMan:20.3.2.4 | GO:A0A078H135 | UniProt:A0A078H135 | EnsemblPlants:CDY31129 | ProteinID:CDY31129 | ProteinID:CDY31129.1 |
| ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0006457 |
| GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016272 | GO:GO:0051082 | EnsemblPlantsGene:GSBRNA2T00047217001 | PFAM:PF01920 |
| InterPro:PFDN4 | InterPro:PFD_beta-like | PIRSF:PIRSF016477 | PANTHER:PTHR21100 | SUPFAM:SSF46579 | UniParc:UPI00025469A7 |
| SEG:seg | : | : | : | : | : |
Description
BnaA08g26790DPrefoldin subunit 4 [Source:UniProtKB/TrEMBL;Acc:A0A078H135]
Coordinates
chrLK032267:+:347502..348466
Molecular Weight (calculated)
15287.0 Da
IEP (calculated)
4.296
GRAVY (calculated)
-0.859
Length
131 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQQGKSSSS GSEMQVTWED QQNINTFSRL NNRFHELEDD IKFAKEKCDN LEDAGNELIL SDEEMVRFQI GEVFAHMPRE EVETKIEEMK EATCKSLEKL
101: QQEKESIVSQ MAELKKVLYA KFKDSINLEE D
101: QQEKESIVSQ MAELKKVLYA KFKDSINLEE D
001: MQQQGSKSGS EMEVTWEDQQ NINIFSRLNN RVHDLDDDIK SAKEKCENLE DAGNELILAD EEMVRFQIGE VFAHVPRDDV ETKIEEMKEA TCKSLEKLEQ
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
Arabidopsis Description
AIP3Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4B5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.