Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra030740.1-P | Field mustard | cytosol | 80.77 | 96.18 |
| CDY31129 | Canola | cytosol | 80.77 | 96.18 |
| CDX93538 | Canola | cytosol | 71.15 | 86.05 |
| CDX95034 | Canola | cytosol | 70.51 | 85.27 |
| Os03t0628900-01 | Rice | cytosol | 61.54 | 76.19 |
| VIT_14s0081g00080.t01 | Wine grape | cytosol | 61.54 | 76.19 |
| Solyc01g097300.2.1 | Tomato | cytosol | 62.18 | 75.78 |
| PGSC0003DMT400050100 | Potato | cytosol | 61.54 | 75.0 |
| EER91208 | Sorghum | cytosol | 60.26 | 74.6 |
| KRG92689 | Soybean | cytosol | 60.26 | 74.6 |
| KRH34096 | Soybean | cytosol | 60.26 | 74.6 |
| Zm00001d013708_P001 | Maize | cytosol | 58.97 | 73.02 |
| TraesCS5D01G388600.1 | Wheat | cytosol | 57.69 | 71.43 |
| GSMUA_Achr4P17760_001 | Banana | cytosol | 62.18 | 61.01 |
| HORVU5Hr1G093710.1 | Barley | cytosol, plastid, vacuole | 21.79 | 17.17 |
Protein Annotations
| EnsemblPlants:CDY66241 | EnsemblPlantsGene:GSBRNA2T00052364001 | GO:A0A078JK99 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0006457 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0016272 | GO:GO:0051082 |
| InterPro:PFDN4 | InterPro:PFD_beta-like | ncoils:Coil | PFAM:PF01920 | PIRSF:PIRSF016477 | ProteinID:CDY66241 |
| ProteinID:CDY66241.1 | SEG:seg | UniParc:UPI0004EEA0C1 | UniProt:A0A078JK99 | MapMan:20.3.2.4 | : |
Description
BnaCnng50130DPrefoldin subunit 4 [Source:UniProtKB/TrEMBL;Acc:A0A078JK99]
Coordinates
chrLK035162:+:3393..4415
Molecular Weight (calculated)
18098.5 Da
IEP (calculated)
4.510
GRAVY (calculated)
-0.586
Length
156 amino acids
Sequence
(BLAST)
(BLAST)
001: MMQQGKSSSS GSEMQVTWED QQNINTFSRL NNRFHELEDD IKLAKLFITD HLSLPSCKIL LNRSATVRML EKCDNLEDAG NELILSDEEM VRFQIGEVFA
101: HIPREEVETK IEEMKEATFK SLENLQHEKE SIVSQMAELK KVLYAKFKDS INLEED
101: HIPREEVETK IEEMKEATFK SLENLQHEKE SIVSQMAELK KVLYAKFKDS INLEED
001: MQQQGSKSGS EMEVTWEDQQ NINIFSRLNN RVHDLDDDIK SAKEKCENLE DAGNELILAD EEMVRFQIGE VFAHVPRDDV ETKIEEMKEA TCKSLEKLEQ
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
101: EKESIVTQMA ALKKVLYAKF KDSINLEED
Arabidopsis Description
AIP3Probable prefoldin subunit 4 [Source:UniProtKB/Swiss-Prot;Acc:Q9M4B5]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.