Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 1
- mitochondrion 1
- nucleus 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY22764 | Canola | cytosol | 16.67 | 12.8 |
| CDY32240 | Canola | cytosol, peroxisome, plasma membrane | 27.08 | 11.98 |
| CDY42534 | Canola | cytosol | 20.83 | 10.26 |
| CDY34463 | Canola | endoplasmic reticulum, plasma membrane, vacuole | 8.33 | 9.09 |
| CDX68671 | Canola | extracellular, plasma membrane, vacuole | 8.33 | 7.62 |
| CDY23571 | Canola | extracellular | 8.33 | 7.62 |
| CDY24206 | Canola | mitochondrion | 10.42 | 7.14 |
| CDY09698 | Canola | nucleus | 13.54 | 7.07 |
| CDY44017 | Canola | extracellular, plasma membrane, vacuole | 7.29 | 6.67 |
| CDX90528 | Canola | golgi, peroxisome, plastid | 13.54 | 6.4 |
| Solyc07g065460.1.1 | Tomato | plasma membrane | 7.29 | 6.14 |
| CDY43365 | Canola | extracellular, plasma membrane, vacuole | 6.25 | 5.66 |
| PGSC0003DMT400057068 | Potato | extracellular, plasma membrane, vacuole | 6.25 | 5.31 |
Protein Annotations
| EnsemblPlants:CDY34462 | EnsemblPlantsGene:GSBRNA2T00056568001 | ProteinID:CDY34462 | ProteinID:CDY34462.1 | UniParc:UPI0004EE404E | UniProt:A0A078H9W7 |
| MapMan:35.2 | : | : | : | : | : |
Description
BnaC01g21710DBnaC01g21710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078H9W7]
Coordinates
chrLK032334:+:313066..313356
Molecular Weight (calculated)
10947.5 Da
IEP (calculated)
10.014
GRAVY (calculated)
-0.597
Length
96 amino acids
Sequence
(BLAST)
(BLAST)
1: MGNCIHTMRS KHGNIVRDLS LDDASTKKIK ESPQLEVAEQ KTGKRRCVKI ILTRKQLEQL LLKCPEGVSF KLPETYGSCN RKWKPSLQPI VEVDNL
001: MKKRLSLKQI LVTLSKLGVC LCVKHLDSNK IQVSNTEIKN GSVCPEDELV SEEKVMEGRR RIKVVITRKQ LDRLLAKQVS LEQLAFVNQR TSLSCFDESK
101: WIPRLESIHE SPEL
101: WIPRLESIHE SPEL
Arabidopsis Description
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansio /.../e; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). [Source:TAIR;Acc:AT5G53710]
SUBAcon: [extracellular]
SUBAcon: [extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.