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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 5
  • peroxisome 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d021755_P001 Maize golgi 81.48 86.54
KXG36471 Sorghum endoplasmic reticulum, golgi 73.68 73.68
EES19844 Sorghum extracellular, golgi 63.94 66.94
EES19846 Sorghum extracellular, golgi 61.6 65.97
EES19845 Sorghum golgi 60.82 65.55
Os01t0869400-01 Rice mitochondrion, nucleus, plastid 43.27 57.07
EES01428 Sorghum golgi 45.22 50.0
VIT_18s0041g01010.t01 Wine grape cytosol 14.04 50.0
EES19849 Sorghum golgi, peroxisome, plastid 46.39 50.0
EES01436 Sorghum golgi, mitochondrion, plastid 44.83 49.68
EES17304 Sorghum cytosol, golgi 46.2 49.48
OQU87498 Sorghum extracellular, golgi 44.25 49.46
OQU92623 Sorghum cytosol, golgi, plastid 46.39 49.28
EES01430 Sorghum cytosol 46.2 49.17
KXG33315 Sorghum cytosol, golgi, plastid 46.59 49.08
KXG33360 Sorghum cytosol 46.2 48.97
KXG22388 Sorghum extracellular, golgi, plastid 41.13 48.96
EES18546 Sorghum cytosol, golgi, plastid 45.61 48.95
EES14846 Sorghum golgi 44.44 48.82
EES19843 Sorghum golgi 45.03 48.63
VIT_16s0050g01670.t01 Wine grape cytosol 26.71 47.24
EES01437 Sorghum golgi, mitochondrion 43.66 47.06
EES01435 Sorghum extracellular, golgi, plasma membrane 43.66 47.06
GSMUA_Achr7P24760_001 Banana extracellular, golgi 32.75 45.9
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 28.07 45.57
VIT_18s0041g00980.t01 Wine grape cytosol 26.12 44.97
GSMUA_Achr4P10400_001 Banana plasma membrane 33.14 43.26
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 39.96 42.98
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 39.96 42.8
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 38.6 42.13
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 39.38 42.08
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 33.72 41.99
VIT_16s0050g01680.t01 Wine grape plastid 38.79 41.81
EES03574 Sorghum golgi, peroxisome 38.6 41.77
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 37.43 40.25
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 36.65 40.17
VIT_18s0041g01080.t01 Wine grape cytosol 37.82 40.17
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 37.62 39.96
VIT_18s0041g00950.t01 Wine grape cytosol 37.43 39.75
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 36.84 39.71
VIT_18s0041g01040.t01 Wine grape cytosol 37.23 39.54
VIT_16s0050g00240.t01 Wine grape cytosol 35.87 39.32
VIT_00s1602g00010.t01 Wine grape cytosol 7.02 39.13
VIT_00s2707g00010.t01 Wine grape cytosol 7.02 39.13
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 35.87 38.9
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 36.26 38.51
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 35.87 38.33
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 34.31 38.26
KRH08809 Soybean cytosol, golgi, plasma membrane 36.06 38.22
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 33.53 38.14
VIT_18s0041g00920.t01 Wine grape cytosol 35.87 38.1
CDY43105 Canola cytosol 34.31 37.93
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 35.67 37.89
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 35.67 37.89
KRH56380 Soybean cytosol, golgi, peroxisome 35.48 37.84
OQU77629 Sorghum cytosol 26.12 37.75
KRH08803 Soybean extracellular, golgi, plastid 34.5 37.42
CDX92078 Canola cytosol 33.72 37.28
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 32.16 37.25
VIT_18s0041g00900.t01 Wine grape cytosol 34.7 37.24
AT3G16520.3 Thale cress cytosol 33.53 37.23
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 35.09 37.11
KRH38320 Soybean golgi, plasma membrane, plastid 33.92 36.79
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 34.7 35.96
KRH38315 Soybean golgi, plasma membrane, plastid 32.75 35.9
KRH08801 Soybean nucleus 32.75 35.67
KRH08808 Soybean cytosol, golgi, plastid 32.16 34.88
KRH38316 Soybean cytosol, golgi, plastid 30.41 34.44
KRH08805 Soybean cytosol, golgi, plastid 31.77 34.39
KRH08804 Soybean extracellular, golgi, plastid 31.77 34.39
EES06270 Sorghum cytosol 32.55 33.94
EES08692 Sorghum plastid 31.19 33.33
EES01087 Sorghum cytosol, golgi, plastid 31.97 33.33
KXG29900 Sorghum plastid 32.75 33.27
KXG29899 Sorghum cytosol 32.55 33.2
EES08777 Sorghum plastid 29.82 32.69
EER98757 Sorghum plastid 30.21 32.29
OQU76647 Sorghum plastid 30.21 32.02
EES10040 Sorghum cytosol, peroxisome, plastid 30.21 31.19
EES09959 Sorghum plastid 24.76 30.83
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8081743UniProt:C5XBI4ncoils:CoilEnsemblPlants:EER99533
ProteinID:EER99533ProteinID:EER99533.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758
GO:GO:0043231GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926
PANTHER:PTHR11926:SF725EnsemblPlantsGene:SORBI_3002G337400SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A84224
RefSeq:XP_002463012.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr2:-:70466636..70469874
Molecular Weight (calculated)
55825.0 Da
IEP (calculated)
5.684
GRAVY (calculated)
-0.055
Length
513 amino acids
Sequence
(BLAST)
001: MEKTIVLYPG LFVSHFVPMM QLADVLLEEG YAIAVALIDI TLDQDVAMAA AVDRVASAKP SVTIHRLPRI QNPPTVADDA EALLWYFEIV RRYNDQLRDF
101: LCSLQQQQQQ QPPRSVVHAV IVDAPSVDAL DVTKELGIPA YTFFASNASA VAVFLQLPWI RAAEGHQPSF KELGDAPVNF SGVPPIPASY LMRETLQEPE
201: SEIYKAMMNA MRRNAEDPDG ILVNTFASLE ARAVAALRDT QSIPPGTGTG SGSGRARRTP PVYCVGPLVA GAGAEAKEKH ECLAWLDRQP ERSVVFLCFG
301: SIGAATHSEE QLREVAVGLR NSGHRFLWVV RAPVRGGGGD TERLFDPRAD ADLDALLPAG FLEGTRDRGL VVKHWAPQVE VLGHRATGAF VTHCGWNSAL
401: EGITAGVPML CWPMYAEQKM NKLFMVEEAM VGVEMVGWRQ GLVGAEEVEA KVRLVMESEE GDKLRVRVAA YRDAATVARR AGGSSRAALG RFLSDAGQKV
501: VFDFRGPPSS PAR
Best Arabidopsis Sequence Match ( AT1G01420.2 )
(BLAST)
001: MQKMADGNTP HVAIIPSPGI GHLIPLVELA KRLLDNHGFT VTFIIPGDSP PSKAQRSVLN SLPSSIASVF LPPADLSDVP STARIETRIS LTVTRSNPAL
101: RELFGSLSAE KRLPAVLVVD LFGTDAFDVA AEFHVSPYIF YASNANVLTF LLHLPKLDET VSCEFRELTE PVIIPGCVPI TGKDFVDPCQ DRKDESYKWL
201: LHNVKRFKEA EGILVNSFVD LEPNTIKIVQ EPAPDKPPVY LIGPLVNSGS HDADVNDEYK CLNWLDNQPF GSVLYVSFGS GGTLTFEQFI ELALGLAESG
301: KRFLWVIRSP SGIASSSYFN PQSRNDPFSF LPQGFLDRTK EKGLVVGSWA PQAQILTHTS IGGFLTHCGW NSSLESIVNG VPLIAWPLYA EQKMNALLLV
401: DVGAALRARL GEDGVVGREE VARVVKGLIE GEEGNAVRKK MKELKEGSVR VLRDDGFSTK SLNEVSLKWK AHQRKIDQEQ ESFL
Arabidopsis Description
UGT72B3UDP-glucosyl transferase 72B3 [Source:TAIR;Acc:AT1G01420]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.