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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
  • cytosol 2
  • plastid 1
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi
Any Predictor:cytosol, mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plastid
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d041374_P001 Maize cytosol 83.3 84.71
EES01428 Sorghum golgi 59.08 60.99
EES19849 Sorghum golgi, peroxisome, plastid 55.11 55.46
EES01435 Sorghum extracellular, golgi, plasma membrane 53.24 53.57
EES01436 Sorghum golgi, mitochondrion, plastid 51.77 53.56
KXG22388 Sorghum extracellular, golgi, plastid 48.02 53.36
EES18546 Sorghum cytosol, golgi, plastid 52.82 52.93
EES19843 Sorghum golgi 52.4 52.84
EES14846 Sorghum golgi 50.94 52.25
OQU87498 Sorghum extracellular, golgi 49.48 51.63
VIT_18s0041g01010.t01 Wine grape cytosol 15.03 50.0
EES01437 Sorghum golgi, mitochondrion 49.06 49.37
KXG33315 Sorghum cytosol, golgi, plastid 48.64 47.84
KXG33360 Sorghum cytosol 48.23 47.73
GSMUA_Achr7P24760_001 Banana extracellular, golgi 36.33 47.54
VIT_16s0050g01670.t01 Wine grape cytosol 28.6 47.24
EES19846 Sorghum extracellular, golgi 46.97 46.97
EES19845 Sorghum golgi 46.35 46.64
EES01430 Sorghum cytosol 46.56 46.27
KXG36471 Sorghum endoplasmic reticulum, golgi 49.48 46.2
EER99533 Sorghum golgi 49.48 46.2
GSMUA_Achr4P10400_001 Banana plasma membrane 37.79 46.06
OQU92623 Sorghum cytosol, golgi, plastid 46.35 45.96
EES19844 Sorghum extracellular, golgi 46.97 45.92
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 29.44 44.62
VIT_18s0041g00980.t01 Wine grape cytosol 27.35 43.96
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 37.79 43.93
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 43.42 43.33
EES03574 Sorghum golgi, peroxisome 42.8 43.25
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 42.38 42.38
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 41.75 41.93
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 41.54 41.81
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 40.29 41.24
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 40.29 41.06
VIT_16s0050g01680.t01 Wine grape plastid 40.5 40.76
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 40.29 40.21
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 39.87 40.04
VIT_18s0041g00950.t01 Wine grape cytosol 40.08 39.75
VIT_18s0041g01080.t01 Wine grape cytosol 39.87 39.54
VIT_16s0050g00240.t01 Wine grape cytosol 38.62 39.53
VIT_18s0041g01040.t01 Wine grape cytosol 39.46 39.13
CDX92078 Canola cytosol 37.79 39.01
AT3G16520.3 Thale cress cytosol 37.58 38.96
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 39.25 38.92
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 37.37 38.91
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 36.53 38.8
CDY43105 Canola cytosol 37.58 38.79
VIT_18s0041g00920.t01 Wine grape cytosol 39.04 38.72
KRH08803 Soybean extracellular, golgi, plastid 38.2 38.69
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 38.62 38.3
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 38.62 38.3
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 38.62 38.3
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 37.58 38.05
VIT_00s2707g00010.t01 Wine grape cytosol 7.31 38.04
VIT_00s1602g00010.t01 Wine grape cytosol 7.31 38.04
KRH08809 Soybean cytosol, golgi, plasma membrane 38.41 38.02
VIT_18s0041g00900.t01 Wine grape cytosol 37.79 37.87
KRH38315 Soybean golgi, plasma membrane, plastid 36.33 37.18
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 38.41 37.17
KRH38320 Soybean golgi, plasma membrane, plastid 36.33 36.79
KRH08801 Soybean nucleus 36.12 36.73
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 37.16 36.7
KRH08808 Soybean cytosol, golgi, plastid 36.12 36.58
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 33.82 36.57
KRH08805 Soybean cytosol, golgi, plastid 36.12 36.5
KRH56380 Soybean cytosol, golgi, peroxisome 36.53 36.38
OQU77629 Sorghum cytosol 26.51 35.77
EES01087 Sorghum cytosol, golgi, plastid 36.12 35.16
KRH38316 Soybean cytosol, golgi, plastid 33.19 35.1
EES08692 Sorghum plastid 35.07 35.0
EES06270 Sorghum cytosol 35.91 34.96
KRH08804 Soybean extracellular, golgi, plastid 34.45 34.81
EES08777 Sorghum plastid 33.82 34.62
OQU76647 Sorghum plastid 34.45 34.09
KXG29899 Sorghum cytosol 35.07 33.4
EER98757 Sorghum plastid 33.4 33.33
EES10040 Sorghum cytosol, peroxisome, plastid 34.45 33.2
KXG29900 Sorghum plastid 34.24 32.48
EES09959 Sorghum plastid 27.14 31.55
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8069719UniProt:C5YQX1ncoils:CoilEnsemblPlants:EES17304
ProteinID:EES17304ProteinID:EES17304.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622
GO:GO:0005623GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758
GO:GO:0043231GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926
PANTHER:PTHR11926:SF445EnsemblPlantsGene:SORBI_3008G149000SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A880D8
RefSeq:XP_002443466.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr8:-:58232301..58233740
Molecular Weight (calculated)
51024.2 Da
IEP (calculated)
4.638
GRAVY (calculated)
0.084
Length
479 amino acids
Sequence
(BLAST)
001: MEKKTVVLYP GVGVGHLAPM LELAKAFLRH GGDQVDVAIA VFEPPVYANG FAATVARAKA SNTSVALHVL PPPPPPASDG GDDADPDVPL ARMLRFLRAT
101: NAPLRDFLRA LSSSRRVQAI VLDMFCADAL DVAAELGLPA YFFFPSGTAG LACFLGLPAM RASVGTSFAA LGDSAVLSFP GVPPFTVADL AQGLADDGEA
201: CKGIIGVAAR MPEARGILIN SFESLEPRAM RALRDGLCVP DRPTPPVYCV GPVVSPGGDK DHDCDCLRWL DAQPDRSVVF LCFGSMGAFP KKQLEEIAVG
301: LERSGQRFLW VVRGPPGAAA DDDDVGALLP AGFQERTEDR GFVVKNWAPQ VDVLRHRAAG AFVTHCGWNS TLEGVAAGLP LLCWPLYAEQ KMNKVRIVEE
401: MKLGVEMRRR DDDDVVTAEE VEAKVRWVME DSDGARALRE RAAAARDSAA EALAEGGPSC AAFLEFLEDL LASEGMVNV
Best Arabidopsis Sequence Match ( AT1G01420.2 )
(BLAST)
001: MQKMADGNTP HVAIIPSPGI GHLIPLVELA KRLLDNHGFT VTFIIPGDSP PSKAQRSVLN SLPSSIASVF LPPADLSDVP STARIETRIS LTVTRSNPAL
101: RELFGSLSAE KRLPAVLVVD LFGTDAFDVA AEFHVSPYIF YASNANVLTF LLHLPKLDET VSCEFRELTE PVIIPGCVPI TGKDFVDPCQ DRKDESYKWL
201: LHNVKRFKEA EGILVNSFVD LEPNTIKIVQ EPAPDKPPVY LIGPLVNSGS HDADVNDEYK CLNWLDNQPF GSVLYVSFGS GGTLTFEQFI ELALGLAESG
301: KRFLWVIRSP SGIASSSYFN PQSRNDPFSF LPQGFLDRTK EKGLVVGSWA PQAQILTHTS IGGFLTHCGW NSSLESIVNG VPLIAWPLYA EQKMNALLLV
401: DVGAALRARL GEDGVVGREE VARVVKGLIE GEEGNAVRKK MKELKEGSVR VLRDDGFSTK SLNEVSLKWK AHQRKIDQEQ ESFL
Arabidopsis Description
UGT72B3UDP-glucosyl transferase 72B3 [Source:TAIR;Acc:AT1G01420]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.