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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 2
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plastid
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d047504_P001 Maize cytosol, golgi, plastid 86.34 85.8
Os01t0734800-01 Rice cytosol 62.73 63.39
KXG33315 Sorghum cytosol, golgi, plastid 62.73 62.22
EES01430 Sorghum cytosol 60.66 60.79
TraesCS5B01G059400.1 Wheat cytosol, extracellular, golgi 60.25 60.62
KXG33360 Sorghum cytosol 60.46 60.33
TraesCS1A01G424000.1 Wheat cytosol 59.01 59.5
HORVU1Hr1G092650.1 Barley cytosol 59.42 58.69
TraesCS3B01G598200.1 Wheat mitochondrion 57.56 57.8
TraesCS3D01G534800.1 Wheat cytosol, extracellular, golgi 57.56 57.8
TraesCS3B01G598400.1 Wheat cytosol 45.55 56.85
TraesCS1D01G432600.1 Wheat cytosol, golgi, plastid 41.41 56.66
TraesCS5D01G068500.1 Wheat cytosol, golgi, plastid, vacuole 59.42 56.16
TraesCS3A01G529400.1 Wheat cytosol, golgi, plastid 37.06 55.08
TraesCS3B01G598500.1 Wheat cytosol, golgi, plastid 32.3 53.98
TraesCS1A01G110800.1 Wheat extracellular, golgi 54.45 52.81
EES19846 Sorghum extracellular, golgi 48.65 49.06
EES19845 Sorghum golgi 47.62 48.32
EES01428 Sorghum golgi 46.38 48.28
EES19844 Sorghum extracellular, golgi 48.65 47.96
EES18546 Sorghum cytosol, golgi, plastid 46.79 47.28
EES19849 Sorghum golgi, peroxisome, plastid 46.58 47.27
VIT_18s0041g01010.t01 Wine grape cytosol 14.08 47.22
KXG22388 Sorghum extracellular, golgi, plastid 42.03 47.1
EES01437 Sorghum golgi, mitochondrion 46.17 46.85
EES01436 Sorghum golgi, mitochondrion, plastid 44.72 46.65
EER99533 Sorghum golgi 49.28 46.39
EES17304 Sorghum cytosol, golgi 45.96 46.35
VIT_16s0050g01670.t01 Wine grape cytosol 27.33 45.52
KXG36471 Sorghum endoplasmic reticulum, golgi 47.83 45.03
EES14846 Sorghum golgi 43.27 44.75
EES01435 Sorghum extracellular, golgi, plasma membrane 43.89 44.54
GSMUA_Achr7P24760_001 Banana extracellular, golgi 33.75 44.54
EES19843 Sorghum golgi 43.69 44.42
OQU87498 Sorghum extracellular, golgi 41.82 44.01
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 28.78 43.99
VIT_18s0041g00980.t01 Wine grape cytosol 26.5 42.95
GSMUA_Achr4P10400_001 Banana plasma membrane 34.78 42.75
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 41.61 41.88
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 34.99 41.02
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 39.75 40.85
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 39.75 40.08
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 39.13 39.62
EES03574 Sorghum golgi, peroxisome 38.72 39.45
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 38.92 39.41
VIT_00s1602g00010.t01 Wine grape cytosol 7.45 39.13
VIT_00s2707g00010.t01 Wine grape cytosol 7.45 39.13
VIT_16s0050g01680.t01 Wine grape plastid 38.3 38.87
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 38.3 38.87
CDY43105 Canola cytosol 36.85 38.36
CDX92078 Canola cytosol 36.65 38.15
AT3G16520.3 Thale cress cytosol 36.44 38.1
VIT_18s0041g01080.t01 Wine grape cytosol 37.47 37.47
VIT_18s0041g00950.t01 Wine grape cytosol 37.06 37.06
KRH56380 Soybean cytosol, golgi, peroxisome 36.85 37.01
VIT_18s0041g01040.t01 Wine grape cytosol 36.85 36.85
KRH08809 Soybean cytosol, golgi, plasma membrane 36.85 36.78
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 36.65 36.65
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 35.4 36.54
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 35.4 36.15
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 35.82 36.04
VIT_18s0041g00920.t01 Wine grape cytosol 36.02 36.02
KRH38315 Soybean golgi, plasma membrane, plastid 34.78 35.9
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 35.82 35.82
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 35.82 35.82
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 33.33 35.7
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 32.71 35.67
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 33.95 35.65
KRH08803 Soybean extracellular, golgi, plastid 34.78 35.52
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 35.4 35.4
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 35.4 35.26
VIT_18s0041g00900.t01 Wine grape cytosol 34.78 35.15
KRH08808 Soybean cytosol, golgi, plastid 34.16 34.88
KRH38320 Soybean golgi, plasma membrane, plastid 34.16 34.88
VIT_16s0050g00240.t01 Wine grape cytosol 33.75 34.83
KRH08805 Soybean cytosol, golgi, plastid 33.95 34.6
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 35.4 34.55
KRH08804 Soybean extracellular, golgi, plastid 33.75 34.39
OQU77629 Sorghum cytosol 25.26 34.37
KRH08801 Soybean nucleus 32.92 33.76
KRH38316 Soybean cytosol, golgi, plastid 31.26 33.33
EES08692 Sorghum plastid 31.88 32.08
EES06270 Sorghum cytosol 32.09 31.5
EES08777 Sorghum plastid 30.43 31.41
KXG29899 Sorghum cytosol 32.51 31.21
OQU76647 Sorghum plastid 31.06 30.99
KXG29900 Sorghum plastid 32.3 30.89
EES01087 Sorghum cytosol, golgi, plastid 31.06 30.49
EER98757 Sorghum plastid 29.81 30.0
EES10040 Sorghum cytosol, peroxisome, plastid 30.64 29.78
EES09959 Sorghum plastid 23.81 27.91
Protein Annotations
EnsemblPlants:OQU92623EnsemblPlantsGene:SORBI_3001G377200Gene3D:3.40.50.2000GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016740GO:GO:0016758InterPro:UDP_glucos_transPANTHER:PTHR11926PANTHER:PTHR11926:SF532
PFAM:PF00201ProteinID:OQU92623ProteinID:OQU92623.1SEG:segSUPFAM:SSF53756UniParc:UPI000B8BB088
UniProt:A0A1Z5S9M5MapMan:50.2.4::::
Description
hypothetical protein
Coordinates
chr1:-:66553610..66556500
Molecular Weight (calculated)
52340.9 Da
IEP (calculated)
5.207
GRAVY (calculated)
0.055
Length
483 amino acids
Sequence
(BLAST)
001: MEQQTVILYP SPGVGHIVPM VQLAKVILTH GYDVTMVIAE PAVSSPDFRI VDVGRVAASN PAITFHVLPP VPYADLAVPG KHHFLLTLQV LRRYNDELER
101: FLRSIVPRQR VHSLVAGMFS TCAVDVGAKL GVPVYTLFAS AAATLAVVAQ LPALLSGRRG AGLKELGDTP LRFLGVPPFP ASHLVRELLE HPDDDELCRT
201: MVDVWTRSTT DASGVLVNTF ESLESPAVQA LRDPRCVPGC VLPPVYCVGP LLIGGDGTAA AAADQERAAE RRRHECLEWL DAQPEKSVVF LCFGSRCAHS
301: AEQLRDIAVG LDRSGQRFLW AVRTPPAGTD DGGGLESLDD TLFPEGFLER TKDRGLVVEV LRHPSTGAFV THCGWNSTLE AITGGVPMLC WPFYAEQQMN
401: KVFVTEGMGV GVEMEGYSTG FVKSEEVEAK VRLVMESEEG SRIRVRAAAL KNEAIAAMQD DGSSQASFAT FLFDAKNLHE QLG
Best Arabidopsis Sequence Match ( AT1G01420.2 )
(BLAST)
001: MQKMADGNTP HVAIIPSPGI GHLIPLVELA KRLLDNHGFT VTFIIPGDSP PSKAQRSVLN SLPSSIASVF LPPADLSDVP STARIETRIS LTVTRSNPAL
101: RELFGSLSAE KRLPAVLVVD LFGTDAFDVA AEFHVSPYIF YASNANVLTF LLHLPKLDET VSCEFRELTE PVIIPGCVPI TGKDFVDPCQ DRKDESYKWL
201: LHNVKRFKEA EGILVNSFVD LEPNTIKIVQ EPAPDKPPVY LIGPLVNSGS HDADVNDEYK CLNWLDNQPF GSVLYVSFGS GGTLTFEQFI ELALGLAESG
301: KRFLWVIRSP SGIASSSYFN PQSRNDPFSF LPQGFLDRTK EKGLVVGSWA PQAQILTHTS IGGFLTHCGW NSSLESIVNG VPLIAWPLYA EQKMNALLLV
401: DVGAALRARL GEDGVVGREE VARVVKGLIE GEEGNAVRKK MKELKEGSVR VLRDDGFSTK SLNEVSLKWK AHQRKIDQEQ ESFL
Arabidopsis Description
UGT72B3UDP-glucosyl transferase 72B3 [Source:TAIR;Acc:AT1G01420]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.