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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi

Predictor Summary:
  • cytosol 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
  • mitochondrion 2
  • plastid 2
Predictors GFP MS/MS Papers
Winner Takes All:golgi
Any Predictor:cytosol, mitochondrion, plastid, secretory
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane, plastid
Predotar:secretory
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3A01G279800.1 Wheat endoplasmic reticulum 67.89 67.6
TraesCS3D01G279700.1 Wheat endoplasmic reticulum, extracellular, golgi 67.89 67.31
TraesCS3D01G279800.1 Wheat endoplasmic reticulum, golgi 67.89 66.74
TraesCS3B01G313400.1 Wheat endoplasmic reticulum 67.24 66.67
TraesCS3B01G313900.1 Wheat endoplasmic reticulum, golgi 65.95 66.23
Os01t0734600-01 Rice golgi 67.24 65.14
TraesCS3A01G280000.1 Wheat endoplasmic reticulum, golgi 68.32 63.4
EES17304 Sorghum cytosol, golgi 60.99 59.08
EES19849 Sorghum golgi, peroxisome, plastid 57.76 56.3
KXG22388 Sorghum extracellular, golgi, plastid 51.29 55.22
EES01436 Sorghum golgi, mitochondrion, plastid 53.66 53.78
EES14846 Sorghum golgi 52.16 51.82
EES18546 Sorghum cytosol, golgi, plastid 53.23 51.67
EES01435 Sorghum extracellular, golgi, plasma membrane 52.59 51.26
EES19843 Sorghum golgi 52.37 51.16
OQU87498 Sorghum extracellular, golgi 50.43 50.98
VIT_18s0041g01010.t01 Wine grape cytosol 15.52 50.0
VIT_16s0050g01670.t01 Wine grape cytosol 31.25 50.0
KXG33360 Sorghum cytosol 51.51 49.38
EES19846 Sorghum extracellular, golgi 50.65 49.06
EES01430 Sorghum cytosol 50.65 48.76
EES19845 Sorghum golgi 49.57 48.32
KXG33315 Sorghum cytosol, golgi, plastid 50.22 47.84
EES01437 Sorghum golgi, mitochondrion 48.71 47.48
GSMUA_Achr7P24760_001 Banana extracellular, golgi 36.85 46.72
OQU92623 Sorghum cytosol, golgi, plastid 48.28 46.38
EES19844 Sorghum extracellular, golgi 48.92 46.33
KXG36471 Sorghum endoplasmic reticulum, golgi 51.08 46.2
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 46.98 45.42
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 46.77 45.3
GSMUA_Achr4P10400_001 Banana plasma membrane 38.36 45.29
EER99533 Sorghum golgi 50.0 45.22
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 45.26 44.68
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 45.91 44.65
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 30.39 44.62
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 38.58 43.45
VIT_18s0041g00980.t01 Wine grape cytosol 27.8 43.29
EES03574 Sorghum golgi, peroxisome 43.32 42.41
VIT_16s0050g01680.t01 Wine grape plastid 43.32 42.23
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 42.24 41.44
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 42.46 41.3
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 41.59 41.24
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 42.46 40.79
CDY43105 Canola cytosol 40.73 40.73
KRH08809 Soybean cytosol, golgi, plasma membrane 42.46 40.7
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 42.03 40.62
VIT_16s0050g00240.t01 Wine grape cytosol 40.95 40.6
CDX92078 Canola cytosol 40.52 40.52
AT3G16520.3 Thale cress cytosol 40.09 40.26
KRH38315 Soybean golgi, plasma membrane, plastid 40.09 39.74
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 40.73 39.71
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 39.01 39.35
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 37.93 39.02
VIT_18s0041g01080.t01 Wine grape cytosol 40.52 38.92
KRH08803 Soybean extracellular, golgi, plastid 39.66 38.9
VIT_18s0041g01040.t01 Wine grape cytosol 40.09 38.51
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 40.09 38.51
VIT_18s0041g00950.t01 Wine grape cytosol 40.09 38.51
KRH38320 Soybean golgi, plasma membrane, plastid 39.01 38.27
KRH08801 Soybean nucleus 38.36 37.79
OQU77629 Sorghum cytosol 28.66 37.46
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 38.58 37.06
VIT_00s1602g00010.t01 Wine grape cytosol 7.33 36.96
VIT_00s2707g00010.t01 Wine grape cytosol 7.33 36.96
VIT_18s0041g00920.t01 Wine grape cytosol 38.36 36.85
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 38.15 36.65
VIT_18s0041g00900.t01 Wine grape cytosol 37.72 36.61
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 37.93 36.29
KRH56380 Soybean cytosol, golgi, peroxisome 37.5 36.17
KRH08804 Soybean extracellular, golgi, plastid 36.85 36.08
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 34.27 35.89
KRH38316 Soybean cytosol, golgi, plastid 34.91 35.76
KRH08805 Soybean cytosol, golgi, plastid 35.99 35.23
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 37.5 35.15
KRH08808 Soybean cytosol, golgi, plastid 35.78 35.1
EES01087 Sorghum cytosol, golgi, plastid 35.56 33.54
EES08692 Sorghum plastid 34.48 33.33
OQU76647 Sorghum plastid 34.27 32.85
EER98757 Sorghum plastid 33.84 32.71
EES06270 Sorghum cytosol 34.48 32.52
KXG29900 Sorghum plastid 35.13 32.28
EES08777 Sorghum plastid 32.33 32.05
KXG29899 Sorghum cytosol 34.27 31.61
EES10040 Sorghum cytosol, peroxisome, plastid 32.76 30.58
EES09959 Sorghum plastid 25.86 29.13
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8062140UniProt:C5XJ44EnsemblPlants:EES01428ProteinID:EES01428
ProteinID:EES01428.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF445
EnsemblPlantsGene:SORBI_3003G287500SUPFAM:SSF53756unigene:Sbi.14455InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A848B9
RefSeq:XP_002456308.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:62066465..62069367
Molecular Weight (calculated)
50432.0 Da
IEP (calculated)
5.487
GRAVY (calculated)
-0.034
Length
464 amino acids
Sequence
(BLAST)
001: MNKKSVVLYP GLGVGHLTPM IELAKLFTQH GVAVTVALVE PPAKSPDFST AVARAAASNP RVTFHVLPPP DPADSSSDGG TPSHHVDQMF SYLKAMNAPL
101: RDLLRSLPAV DALVVDMFCR DALGVAAELN LPVYYFYASG ASALAVFLNL PRMTTTGFLQ AAAGDSVLSL PGAPPFRASE LPELIRNGSA TGETIFRMLH
201: AIPEANGILV NTFESLEPRA VRALRDGLCV PDRSTPPVYC IGPLVSGGGG DKEEHECLRW LDMQPDQSVV FLSFGSLGRF PKKQLEEMAI GLEKSGQRFL
301: WVVRSPANNG EDVLGQPLPE PDLEALLPEG FLERTRDRGL VLKSWAPQVD VLGHRATGAF VTHCGWNSTL EGIMAGLPLL CWPLYAEQRM NKVFIVEEMK
401: LGVEMNGYDE GMVKAEEVET KVKWVMESQG GRALRDRMVE VKDRAVKALK EGGSSHDAFV EFLK
Best Arabidopsis Sequence Match ( AT3G16520.3 )
(BLAST)
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV
101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI
201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ
301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS
401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETGSSHT ALTTLLQSWS PK
Arabidopsis Description
UGT88A1UDP-glycosyltransferase 88A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.