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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 1
  • peroxisome 3
  • plastid 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 2
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome
Any Predictor:mitochondrion, nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:plastid
Predotar:secretory
PProwler:secretory
PTS1:peroxisome
WoLF PSORT:peroxisome
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012780_P001 Maize cytosol 57.81 76.75
TraesCS2A01G462300.1 Wheat golgi 66.67 65.97
TraesCS2B01G483900.1 Wheat cytosol 66.88 65.9
TraesCS2D01G462700.1 Wheat cytosol, endoplasmic reticulum, golgi 65.4 64.32
HORVU7Hr1G115260.1 Barley golgi 49.58 62.5
TraesCS5B01G471000.1 Wheat cytosol, golgi 63.71 62.14
HORVU5Hr1G110440.1 Barley cytosol, plasma membrane 63.71 62.14
TraesCS5A01G461100.1 Wheat cytosol, plasma membrane 62.87 61.32
TraesCS5B01G471100.1 Wheat cytosol 60.97 60.97
TraesCS2B01G624400.1 Wheat cytosol, golgi, plastid 62.66 60.24
TraesCS2A01G562000.1 Wheat plastid 61.6 58.87
TraesCS2D01G462500.1 Wheat nucleus 59.28 58.18
TraesCS5D01G473500.1 Wheat mitochondrion, plastid 63.5 57.66
TraesCS3A01G279100.1 Wheat golgi 60.13 56.55
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 55.7 55.0
Os01t0735300-01 Rice cytosol, golgi, plastid 56.54 54.58
VIT_18s0041g01010.t01 Wine grape cytosol 16.24 53.47
VIT_16s0050g01670.t01 Wine grape cytosol 30.17 49.31
VIT_18s0041g00980.t01 Wine grape cytosol 28.9 45.97
GSMUA_Achr7P24760_001 Banana extracellular, golgi 35.23 45.63
EES19849 Sorghum golgi, peroxisome, plastid 45.78 45.59
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 30.38 45.57
KXG22388 Sorghum extracellular, golgi, plastid 41.14 45.24
EES18546 Sorghum cytosol, golgi, plastid 44.94 44.56
OQU87498 Sorghum extracellular, golgi 43.04 44.44
EES01435 Sorghum extracellular, golgi, plasma membrane 44.3 44.12
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 43.25 43.62
VIT_00s2707g00010.t01 Wine grape cytosol 8.44 43.48
VIT_00s1602g00010.t01 Wine grape cytosol 8.44 43.48
EES14846 Sorghum golgi 42.83 43.47
EES01428 Sorghum golgi 42.41 43.32
VIT_16s0050g01680.t01 Wine grape plastid 43.46 43.28
GSMUA_Achr4P10400_001 Banana plasma membrane 35.87 43.26
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 41.77 43.04
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 43.46 43.01
KRH08803 Soybean extracellular, golgi, plastid 42.83 42.92
EES01437 Sorghum golgi, mitochondrion 43.04 42.86
EES17304 Sorghum cytosol, golgi 43.25 42.8
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 43.04 42.77
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 37.13 42.72
KRH08801 Soybean nucleus 42.41 42.68
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 42.83 42.56
EES19843 Sorghum golgi 42.62 42.53
EES01436 Sorghum golgi, mitochondrion, plastid 41.14 42.12
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 42.19 42.02
KRH38320 Soybean golgi, plasma membrane, plastid 41.77 41.86
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 41.77 41.86
VIT_18s0041g01080.t01 Wine grape cytosol 42.41 41.61
VIT_18s0041g00950.t01 Wine grape cytosol 41.98 41.2
KRH38316 Soybean cytosol, golgi, plastid 39.24 41.06
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 40.51 41.03
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 41.77 40.99
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 41.35 40.83
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 41.56 40.79
VIT_18s0041g01040.t01 Wine grape cytosol 41.35 40.58
VIT_16s0050g00240.t01 Wine grape cytosol 39.87 40.38
VIT_18s0041g00900.t01 Wine grape cytosol 40.72 40.38
VIT_18s0041g00920.t01 Wine grape cytosol 40.93 40.17
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 40.51 39.75
KRH38315 Soybean golgi, plasma membrane, plastid 39.24 39.74
OQU77629 Sorghum cytosol 29.75 39.72
CDY43105 Canola cytosol 38.82 39.66
AT3G16520.3 Thale cress cytosol 38.61 39.61
CDX92078 Canola cytosol 38.61 39.44
KRH08809 Soybean cytosol, golgi, plasma membrane 40.08 39.26
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 37.34 39.25
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 40.93 39.19
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 36.5 39.05
EES19846 Sorghum extracellular, golgi 39.45 39.04
EES01430 Sorghum cytosol 39.66 39.0
EES19844 Sorghum extracellular, golgi 40.3 38.98
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 39.87 38.97
OQU92623 Sorghum cytosol, golgi, plastid 39.45 38.72
KXG33315 Sorghum cytosol, golgi, plastid 39.66 38.6
EER99533 Sorghum golgi 41.77 38.6
EES19845 Sorghum golgi 38.4 38.24
KXG36471 Sorghum endoplasmic reticulum, golgi 41.35 38.21
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 38.82 38.1
KRH56380 Soybean cytosol, golgi, peroxisome 38.61 38.05
KXG33360 Sorghum cytosol 38.82 38.02
KRH08805 Soybean cytosol, golgi, plastid 37.55 37.55
KRH08808 Soybean cytosol, golgi, plastid 37.34 37.42
KRH08804 Soybean extracellular, golgi, plastid 36.5 36.5
EES01087 Sorghum cytosol, golgi, plastid 35.23 33.94
EER98757 Sorghum plastid 34.18 33.75
KXG29899 Sorghum cytosol 35.23 33.2
EES08692 Sorghum plastid 33.12 32.71
EES08777 Sorghum plastid 32.28 32.69
EES06270 Sorghum cytosol 33.33 32.11
OQU76647 Sorghum plastid 32.7 32.02
KXG29900 Sorghum plastid 33.76 31.68
EES10040 Sorghum cytosol, peroxisome, plastid 32.91 31.39
EES09959 Sorghum plastid 24.47 28.16
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8075541UniProt:C5XJ55EnsemblPlants:EES03574ProteinID:EES03574
ProteinID:EES03574.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF678
EnsemblPlantsGene:SORBI_3003G288200SUPFAM:SSF53756unigene:Sbi.8889InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A84E66
RefSeq:XP_002458454.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:-:62127401..62129319
Molecular Weight (calculated)
51187.7 Da
IEP (calculated)
5.866
GRAVY (calculated)
0.041
Length
474 amino acids
Sequence
(BLAST)
001: MATPSESQDK KALVVIYAPP MMISHLFSLV DLGELLAAHS LDVAVVLGGR TDDTATGGGA AAGSFAEGLA AAHPQLSFHL LPHVTRPRDV PAHDYVAQTF
101: ELARASDSDL REFLRAASPS PAALVLDFFC GSAVDVGTEL GIPTYFFFTS SIAGLAELLY HPLIHEQTSI SLRHLGGELL RVPGVAPIPV DDLPAAYQDR
201: DSLGNRLFLA LSEQMCNSHG LIVNSFRSLE PRATDAIVAG LCTPPGRRTP PLHCIGPVIK PLEEVGEKRH ECLAWLDAQP EASVVFLCFG SMGRFSAEQT
301: RHVARGLETS GQRFLWVVRR PPAGEEDGLG ALLPEGFLAR TKGKGLVVEA WAPQREVLAH GAVGGFVTHC GWNSVLEAIM GGVPMLAWPM YAEQRMNKVF
401: LVEDLRLAVA MEGYDKEIVK DEEVAAKVKW LMESDGGREL RERTRAAMRK AKEALSAGGE SSTALLELVR QCKM
Best Arabidopsis Sequence Match ( AT2G29730.1 )
(BLAST)
001: MRNVELIFIP TPTVGHLVPF LEFARRLIEQ DDRIRITILL MKLQGQSHLD TYVKSIASSQ PFVRFIDVPE LEEKPTLGST QSVEAYVYDV IERNIPLVRN
101: IVMDILTSLA LDGVKVKGLV VDFFCLPMID VAKDISLPFY VFLTTNSGFL AMMQYLADRH SRDTSVFVRN SEEMLSIPGF VNPVPANVLP SALFVEDGYD
201: AYVKLAILFT KANGILVNSS FDIEPYSVNH FLQEQNYPSV YAVGPIFDLK AQPHPEQDLT RRDELMKWLD DQPEASVVFL CFGSMARLRG SLVKEIAHGL
301: ELCQYRFLWS LRKEEVTKDD LPEGFLDRVD GRGMICGWSP QVEILAHKAV GGFVSHCGWN SIVESLWFGV PIVTWPMYAE QQLNAFLMVK ELKLAVELKL
401: DYRVHSDEIV NANEIETAIR YVMDTDNNVV RKRVMDISQM IQRATKNGGS SFAAIEKFIY DVIGIKP
Arabidopsis Description
UGT71D1Glycosyltransferase (Fragment) [Source:UniProtKB/TrEMBL;Acc:W8PVN2]
SUBAcon: [golgi,plastid,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.