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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
  • peroxisome 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, peroxisome, plastid
Any Predictor:nucleus, peroxisome, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:peroxisome
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KXG22388 Sorghum extracellular, golgi, plastid 86.34 95.36
Zm00001d038763_P001 Maize extracellular 68.49 79.9
TraesCS1B01G362100.1 Wheat golgi 67.65 67.93
TraesCS1D01G350500.1 Wheat endoplasmic reticulum, extracellular, golgi 67.65 67.93
HORVU1Hr1G081940.1 Barley extracellular, golgi 67.23 67.51
TraesCS1A01G347600.1 Wheat extracellular, golgi, plastid 67.44 67.44
Os05t0527900-01 Rice golgi 62.6 64.09
TraesCS2B01G459900.1 Wheat cytosol, extracellular, golgi 58.19 61.83
EES01428 Sorghum golgi 56.3 57.76
EES17304 Sorghum cytosol, golgi 55.46 55.11
EES18546 Sorghum cytosol, golgi, plastid 54.62 54.39
EES01436 Sorghum golgi, mitochondrion, plastid 51.68 53.13
EES14846 Sorghum golgi 51.05 52.03
EES01435 Sorghum extracellular, golgi, plasma membrane 51.89 51.89
OQU87498 Sorghum extracellular, golgi 49.79 51.63
EES19843 Sorghum golgi 50.63 50.74
VIT_18s0041g01010.t01 Wine grape cytosol 15.34 50.69
VIT_16s0050g01670.t01 Wine grape cytosol 30.88 50.69
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 49.37 48.96
GSMUA_Achr7P24760_001 Banana extracellular, golgi 37.6 48.91
EES01437 Sorghum golgi, mitochondrion 48.53 48.53
EES19846 Sorghum extracellular, golgi 48.53 48.23
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 31.3 47.15
KXG33315 Sorghum cytosol, golgi, plastid 47.9 46.82
OQU92623 Sorghum cytosol, golgi, plastid 47.27 46.58
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 46.64 46.54
EER99533 Sorghum golgi 50.0 46.39
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 46.64 46.35
VIT_18s0041g00980.t01 Wine grape cytosol 28.99 46.31
KXG33360 Sorghum cytosol 46.85 46.07
EES19845 Sorghum golgi 45.8 45.8
EES03574 Sorghum golgi, peroxisome 45.59 45.78
EES19844 Sorghum extracellular, golgi 47.06 45.71
EES01430 Sorghum cytosol 46.22 45.64
KXG36471 Sorghum endoplasmic reticulum, golgi 48.95 45.42
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 44.33 44.89
VIT_16s0050g01680.t01 Wine grape plastid 44.54 44.54
GSMUA_Achr4P10400_001 Banana plasma membrane 36.55 44.27
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 43.7 43.7
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 43.7 43.61
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 37.6 43.45
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 41.6 42.31
VIT_16s0050g00240.t01 Wine grape cytosol 41.39 42.09
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 39.71 41.91
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 41.39 41.65
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 40.13 41.52
VIT_18s0041g00950.t01 Wine grape cytosol 42.02 41.41
VIT_18s0041g01040.t01 Wine grape cytosol 42.02 41.41
KRH08803 Soybean extracellular, golgi, plastid 40.97 41.23
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 41.81 41.2
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 41.81 41.2
VIT_18s0041g01080.t01 Wine grape cytosol 41.81 41.2
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 41.39 41.04
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 41.6 40.99
VIT_18s0041g00920.t01 Wine grape cytosol 41.39 40.79
CDY43105 Canola cytosol 39.71 40.73
CDX92078 Canola cytosol 39.71 40.73
KRH08809 Soybean cytosol, golgi, plasma membrane 41.39 40.7
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 41.18 40.58
VIT_18s0041g00900.t01 Wine grape cytosol 40.34 40.17
AT3G16520.3 Thale cress cytosol 38.87 40.04
KRH38320 Soybean golgi, plasma membrane, plastid 39.71 39.96
KRH38315 Soybean golgi, plasma membrane, plastid 38.87 39.53
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 36.76 39.5
KRH08801 Soybean nucleus 39.08 39.49
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 40.55 38.99
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 39.71 38.97
OQU77629 Sorghum cytosol 28.99 38.87
KRH08808 Soybean cytosol, golgi, plastid 37.82 38.05
KRH38316 Soybean cytosol, golgi, plastid 36.13 37.97
KRH08805 Soybean cytosol, golgi, plastid 37.6 37.76
KRH08804 Soybean extracellular, golgi, plastid 37.18 37.34
KRH56380 Soybean cytosol, golgi, peroxisome 37.6 37.21
VIT_00s1602g00010.t01 Wine grape cytosol 6.93 35.87
VIT_00s2707g00010.t01 Wine grape cytosol 6.93 35.87
EES06270 Sorghum cytosol 36.55 35.37
EES01087 Sorghum cytosol, golgi, plastid 35.5 34.35
EER98757 Sorghum plastid 33.61 33.33
EES08692 Sorghum plastid 33.4 33.12
KXG29899 Sorghum cytosol 34.87 33.0
EES08777 Sorghum plastid 32.35 32.91
KXG29900 Sorghum plastid 34.87 32.87
OQU76647 Sorghum plastid 32.98 32.44
EES10040 Sorghum cytosol, peroxisome, plastid 32.77 31.39
EES09959 Sorghum plastid 25.0 28.88
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8068960UniProt:C5Z1G0EnsemblPlants:EES19849ProteinID:EES19849
ProteinID:EES19849.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF431
EnsemblPlantsGene:SORBI_3009G206400SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A890FBRefSeq:XP_002441419.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:-:55435072..55436757
Molecular Weight (calculated)
51785.2 Da
IEP (calculated)
5.470
GRAVY (calculated)
0.057
Length
476 amino acids
Sequence
(BLAST)
001: MRDTVVLYPS LGVSHLLPMV ELSGLFLRRG LAVTFVVVEP PAASTDASYR VARAAEANPS IHFHVLPLPP PDTTVSPELP RDPFALFRLA NAPLRDYLRS
101: VSPSAASMRA LVFDFFCIDA LDVAAELGVP AYLFYTSGAC SLAVSLHLPH KQAEVSASFG DIGDAPLCFP GVPPFIPTDL PENALDRDNK VYRKILYTFE
201: RVPACHGILV NTFEWLEAKA VAAIREGACV PGRATPPVYC VGPLVSGGGE AKKHECLSWL DAQPEKSVVF FCFGSMGSFS KRQLEAIATG LEMSGQRFLW
301: VVRSPRRDGA SLYADDGHQP PEPDLGELLP EGFLERTKAR GLVAKSWAPQ ADVLRHRATG AFVTHCGWNS VLEGITAGVP LLCWPLYAEQ RLNKVFMVEE
401: ARVGVEMAGY DREVVTAEEV EAKVRWVMDS EDGRALRARV MVAKEKAVEA VQQGGTSHNA LVELLADLGF DECGTH
Best Arabidopsis Sequence Match ( AT3G16520.3 )
(BLAST)
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV
101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI
201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ
301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS
401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETGSSHT ALTTLLQSWS PK
Arabidopsis Description
UGT88A1UDP-glycosyltransferase 88A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.