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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi

Predictor Summary:
  • nucleus 1
  • mitochondrion 4
  • plasma membrane 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion
Any Predictor:mitochondrion, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plasma membrane
Predotar:secretory
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012782_P001 Maize golgi, mitochondrion, peroxisome, plastid 91.81 92.19
HORVU3Hr1G069890.2 Barley cytosol 52.1 79.23
TraesCS3D01G279400.1 Wheat golgi, mitochondrion, peroxisome, plastid 76.68 77.49
TraesCS3B01G313700.1 Wheat golgi, mitochondrion, peroxisome, plastid 76.05 76.86
TraesCS3A01G279500.1 Wheat golgi, mitochondrion, peroxisome, plastid 76.05 76.86
Os01t0735900-01 Rice mitochondrion 77.1 76.78
TraesCS3D01G279500.1 Wheat mitochondrion, peroxisome, plastid, vacuole 75.21 75.69
TraesCS3A01G279600.1 Wheat golgi, mitochondrion, peroxisome, plastid 74.58 75.37
TraesCS3B01G313600.1 Wheat golgi, mitochondrion, peroxisome, plastid 73.11 73.89
EES18546 Sorghum cytosol, golgi, plastid 53.57 53.35
EES01436 Sorghum golgi, mitochondrion, plastid 51.47 52.92
EES14846 Sorghum golgi 49.58 50.54
VIT_18s0041g01010.t01 Wine grape cytosol 15.13 50.0
EES17304 Sorghum cytosol, golgi 49.37 49.06
EES01428 Sorghum golgi 47.48 48.71
EES19843 Sorghum golgi 48.53 48.63
EES19849 Sorghum golgi, peroxisome, plastid 48.53 48.53
GSMUA_Achr7P24760_001 Banana extracellular, golgi 36.55 47.54
EES01435 Sorghum extracellular, golgi, plasma membrane 46.64 46.64
OQU87498 Sorghum extracellular, golgi 44.75 46.41
KXG22388 Sorghum extracellular, golgi, plastid 42.02 46.4
OQU92623 Sorghum cytosol, golgi, plastid 46.85 46.17
VIT_16s0050g01670.t01 Wine grape cytosol 27.52 45.17
EES19844 Sorghum extracellular, golgi 46.43 45.1
EES19846 Sorghum extracellular, golgi 45.17 44.89
VIT_18s0041g00980.t01 Wine grape cytosol 27.73 44.3
KXG33315 Sorghum cytosol, golgi, plastid 45.17 44.15
EES19845 Sorghum golgi 44.12 44.12
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 29.2 43.99
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 44.33 43.96
EER99533 Sorghum golgi 47.06 43.66
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 43.7 43.61
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 43.7 43.42
KXG33360 Sorghum cytosol 44.12 43.39
EES01430 Sorghum cytosol 43.91 43.36
KXG36471 Sorghum endoplasmic reticulum, golgi 46.43 43.08
EES03574 Sorghum golgi, peroxisome 42.86 43.04
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 42.02 42.55
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 35.92 41.5
GSMUA_Achr4P10400_001 Banana plasma membrane 34.24 41.48
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 40.76 40.76
VIT_16s0050g01680.t01 Wine grape plastid 40.55 40.55
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 40.97 40.37
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 40.34 40.25
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 38.03 40.13
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 39.29 39.96
KRH08809 Soybean cytosol, golgi, plasma membrane 40.55 39.88
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 39.71 39.38
CDX92078 Canola cytosol 38.03 39.01
CDY43105 Canola cytosol 38.03 39.01
VIT_18s0041g01080.t01 Wine grape cytosol 39.29 38.72
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 39.29 38.72
VIT_18s0041g00950.t01 Wine grape cytosol 38.87 38.3
VIT_16s0050g00240.t01 Wine grape cytosol 37.6 38.25
VIT_18s0041g01040.t01 Wine grape cytosol 38.66 38.1
VIT_00s1602g00010.t01 Wine grape cytosol 7.35 38.04
VIT_00s2707g00010.t01 Wine grape cytosol 7.35 38.04
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 35.29 37.92
VIT_18s0041g00920.t01 Wine grape cytosol 38.45 37.89
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 38.45 37.89
KRH08803 Soybean extracellular, golgi, plastid 37.4 37.63
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 38.03 37.47
KRH38315 Soybean golgi, plasma membrane, plastid 36.76 37.39
KRH56380 Soybean cytosol, golgi, peroxisome 37.6 37.21
AT3G16520.3 Thale cress cytosol 35.92 37.01
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 35.71 36.96
VIT_18s0041g00900.t01 Wine grape cytosol 36.76 36.61
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 38.03 36.57
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 36.13 36.36
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 36.97 36.29
OQU77629 Sorghum cytosol 26.68 35.77
KRH38320 Soybean golgi, plasma membrane, plastid 35.5 35.73
KRH08801 Soybean nucleus 35.29 35.67
KRH08808 Soybean cytosol, golgi, plastid 35.08 35.31
KRH08805 Soybean cytosol, golgi, plastid 34.87 35.02
KRH08804 Soybean extracellular, golgi, plastid 34.45 34.6
KXG29900 Sorghum plastid 36.34 34.26
KRH38316 Soybean cytosol, golgi, plastid 32.56 34.22
EES08692 Sorghum plastid 34.03 33.75
EES08777 Sorghum plastid 32.77 33.33
EER98757 Sorghum plastid 32.98 32.71
EES06270 Sorghum cytosol 33.61 32.52
OQU76647 Sorghum plastid 32.98 32.44
EES01087 Sorghum cytosol, golgi, plastid 33.19 32.11
EES10040 Sorghum cytosol, peroxisome, plastid 33.19 31.79
KXG29899 Sorghum cytosol 33.19 31.41
EES09959 Sorghum plastid 25.0 28.88
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8062149UniProt:C5XJ53EnsemblPlants:EES01437ProteinID:EES01437
ProteinID:EES01437.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF529
EnsemblPlantsGene:SORBI_3003G288100SUPFAM:SSF53756unigene:Sbi.7338InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A8491F
RefSeq:XP_002456317.1SEG:seg::::
Description
hypothetical protein
Coordinates
chr3:+:62120088..62121518
Molecular Weight (calculated)
51133.5 Da
IEP (calculated)
5.759
GRAVY (calculated)
0.073
Length
476 amino acids
Sequence
(BLAST)
001: MGSVVVLYTW MVRGHLHPMA QLADRLAGHG VPITMAIADV PSSSDSHQTV ARLSATYPSV SFHLLQPTTA RSGDKADPDA DPFITLIADL RATNPALLAF
101: VRSLPSVKAL VLDFFCGCAL DAAAELGLPA YLFFTSGASP LAAYLHIPVM RSDVSFGDMG RSLLHFPGVH PVPASDLPEV LLGPHNEQYK ATIDLFEQLP
201: RAKGVLANTF EWLEPRAVRA IEEGSPRPGG EPVPRLFCVG PLVGEERGGD GNAKAKHECL TWLDARPARS VVFLCFGSAS SVPAGQLREI AVGLERSGHA
301: FLWAVRAPVA PDADSTKRFE GRGEAALEAL LPDGFLDRTR GRGLVVPTWA PQVEVLRHPA TGAFVTHCGW NSTLEAVTAG VPMVCWPMYA EQRLNKVFVA
401: EGMKLGVVME GYDEAMVKAE EVEAKVRLVM ESQQGKELRD RVAVAKDEAA AALETAGSSK AALVDFIIDM EISTRQ
Best Arabidopsis Sequence Match ( AT3G16520.1 )
(BLAST)
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV
101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI
201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ
301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS
401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETDCNSD G
Arabidopsis Description
UGT88A1UDP-glycosyltransferase 88A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.