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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: golgi, plastid, cytosol

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 3
  • golgi 3
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, golgi, plastid
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d038765_P001 Maize golgi, peroxisome, plastid 92.89 92.89
Zm00001d045952_P001 Maize endoplasmic reticulum, golgi 52.72 88.73
TraesCS2A01G504000.1 Wheat cytosol, mitochondrion 50.42 83.97
TraesCS1D01G350000.1 Wheat endoplasmic reticulum 81.59 82.11
TraesCS1A01G347100.1 Wheat endoplasmic reticulum, golgi, plasma membrane 81.59 82.11
TraesCS2B01G532400.1 Wheat endoplasmic reticulum, golgi, peroxisome 80.75 81.43
TraesCS2B01G532300.1 Wheat endoplasmic reticulum, golgi, plasma membrane 80.75 81.43
TraesCS1B01G361300.1 Wheat endoplasmic reticulum 80.75 81.26
TraesCS2D01G504600.1 Wheat endoplasmic reticulum, golgi, peroxisome 80.33 80.84
Os05t0526800-01 Rice plasma membrane 79.71 79.38
Os05t0526900-01 Rice endoplasmic reticulum, golgi, plastid 76.36 76.52
HORVU1Hr1G081900.5 Barley golgi, mitochondrion, plastid 80.54 76.24
EES19843 Sorghum golgi 58.79 59.16
EES14846 Sorghum golgi 57.11 58.46
EES01436 Sorghum golgi, mitochondrion, plastid 56.49 58.32
EES01435 Sorghum extracellular, golgi, plasma membrane 57.53 57.77
OQU87498 Sorghum extracellular, golgi 55.02 57.3
EES19849 Sorghum golgi, peroxisome, plastid 54.39 54.62
KXG22388 Sorghum extracellular, golgi, plastid 48.33 53.6
EES01437 Sorghum golgi, mitochondrion 53.35 53.57
EES01428 Sorghum golgi 51.67 53.23
EES17304 Sorghum cytosol, golgi 52.93 52.82
VIT_16s0050g01670.t01 Wine grape cytosol 32.01 52.76
VIT_18s0041g01010.t01 Wine grape cytosol 15.06 50.0
EES19846 Sorghum extracellular, golgi 48.74 48.64
EES19844 Sorghum extracellular, golgi 49.79 48.57
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 32.01 48.42
KXG33360 Sorghum cytosol 48.95 48.35
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 48.54 48.33
GSMUA_Achr7P24760_001 Banana extracellular, golgi 36.82 48.09
EES19845 Sorghum golgi 47.28 47.48
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 47.49 47.39
VIT_18s0041g00980.t01 Wine grape cytosol 29.5 47.32
EES01430 Sorghum cytosol 47.7 47.3
KXG33315 Sorghum cytosol, golgi, plastid 47.91 47.02
OQU92623 Sorghum cytosol, golgi, plastid 47.28 46.79
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 46.44 46.54
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 45.4 46.17
KXG36471 Sorghum endoplasmic reticulum, golgi 49.16 45.81
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 45.61 45.7
EER99533 Sorghum golgi 48.95 45.61
VIT_16s0050g01680.t01 Wine grape plastid 45.4 45.59
EES03574 Sorghum golgi, peroxisome 44.56 44.94
GSMUA_Achr4P10400_001 Banana plasma membrane 36.82 44.78
AT3G16520.3 Thale cress cytosol 41.84 43.29
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 42.68 42.86
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 36.82 42.72
CDX92078 Canola cytosol 41.42 42.67
VIT_18s0041g01080.t01 Wine grape cytosol 42.89 42.44
VIT_18s0041g00950.t01 Wine grape cytosol 42.68 42.24
KRH38315 Soybean golgi, plasma membrane, plastid 41.21 42.09
CDY43105 Canola cytosol 40.8 42.03
VIT_18s0041g01040.t01 Wine grape cytosol 42.05 41.61
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 42.05 41.61
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 42.05 41.61
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 38.91 41.24
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 40.38 41.24
VIT_16s0050g00240.t01 Wine grape cytosol 39.96 40.81
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 40.38 40.8
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 40.8 40.62
KRH08803 Soybean extracellular, golgi, plastid 40.17 40.59
VIT_18s0041g00900.t01 Wine grape cytosol 40.59 40.59
VIT_18s0041g00920.t01 Wine grape cytosol 41.0 40.58
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 40.38 39.96
KRH38320 Soybean golgi, plasma membrane, plastid 39.54 39.96
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 38.28 39.78
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 36.82 39.73
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 40.17 39.59
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 39.54 39.13
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 40.38 38.99
KRH56380 Soybean cytosol, golgi, peroxisome 39.12 38.88
KRH08809 Soybean cytosol, golgi, plasma membrane 39.33 38.84
KRH08808 Soybean cytosol, golgi, plastid 38.28 38.69
KRH08801 Soybean nucleus 38.08 38.64
KRH38316 Soybean cytosol, golgi, plastid 36.61 38.63
KRH08804 Soybean extracellular, golgi, plastid 38.28 38.61
KRH08805 Soybean cytosol, golgi, plastid 38.08 38.4
OQU77629 Sorghum cytosol 28.03 37.75
EES08777 Sorghum plastid 35.77 36.54
EES08692 Sorghum plastid 36.61 36.46
EES06270 Sorghum cytosol 37.45 36.38
VIT_00s2707g00010.t01 Wine grape cytosol 6.9 35.87
VIT_00s1602g00010.t01 Wine grape cytosol 6.9 35.87
OQU76647 Sorghum plastid 36.19 35.74
EES10040 Sorghum cytosol, peroxisome, plastid 36.19 34.81
EER98757 Sorghum plastid 34.1 33.96
KXG29899 Sorghum cytosol 34.94 33.2
EES01087 Sorghum cytosol, golgi, plastid 33.89 32.93
KXG29900 Sorghum plastid 33.68 31.88
EES09959 Sorghum plastid 27.2 31.55
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8068954UniProt:C5Z1F2EnsemblPlants:EES18546ProteinID:EES18546
ProteinID:EES18546.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF358
EnsemblPlantsGene:SORBI_3009G205600SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A88C5DRefSeq:XP_002440116.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:55382641..55384578
Molecular Weight (calculated)
51660.5 Da
IEP (calculated)
5.468
GRAVY (calculated)
0.131
Length
478 amino acids
Sequence
(BLAST)
001: MAEPSPNPTV VLHACLGVGH LIPMVELAKQ LLRRGLAVII AVPTPPASTA DFFASSASAV AALAAANPAV SFHHLPPPDY PVPDSDPFLQ MLDALRLTVP
101: SLTAFLRSLP SVAGLVLDLF CGDALDAAAA TGIPAYFYYT SCAGDLAAFL YLPHYFATTE GGPSFKDMGK ALLHFPGIPP IPASDMPHTV VDRTSRTCAS
201: RIVHYGRVPE ARGVLINTYE WLEARAVRAL RDGVCVPGRP TPPVYPIGPL IVKGEEAAEE VERHACLSWL DAQPERSVVF LCFGSLGAVS AAQIKEIARG
301: LESSGHRFLW VVRSPPEDPA KFFLARPEPD LDSLLPEGFL ERTSGRGMVV KMWAPQVEVL RHAATGAFMT HCGWNSVLEA ASAGVPMLCW PMYAEQRLNK
401: VFVVDEIKAG VVMDGYDEEL VRAEEVEKKV RLVMESEEGE KLRGRLAMAK EKAAEALADG GPSWVAFEEF LKDLKLAK
Best Arabidopsis Sequence Match ( AT3G16520.2 )
(BLAST)
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV
101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI
201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ
301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS
401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETE
Arabidopsis Description
UGT88A1UDP-glycosyltransferase 88A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.