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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, golgi, plastid

Predictor Summary:
  • nucleus 1
  • extracellular 1
  • mitochondrion 3
  • plastid 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, mitochondrion, plastid
Any Predictor:extracellular, golgi, mitochondrion, nucleus, plastid
BaCelLo:nucleus
EpiLoc:extracellular
iPSORT:mitochondrion
MultiLoc:mitochondrion
Plant-mPloc:plastid
PProwler:mitochondrion
WoLF PSORT:plastid
YLoc:golgi
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d012785_P001 Maize cytosol, endoplasmic reticulum, golgi 90.93 89.96
TraesCS3A01G279700.1 Wheat cytosol, golgi, plastid 74.3 72.42
TraesCS3D01G279600.1 Wheat cytosol, golgi, plastid 73.22 71.07
TraesCS3B01G313500.1 Wheat cytosol, endoplasmic reticulum, golgi 73.0 71.01
HORVU3Hr1G069830.1 Barley cytosol, golgi, plastid 73.0 70.27
Os01t0736100-02 Rice golgi 68.68 67.09
OQU87498 Sorghum extracellular, golgi 64.58 65.14
EES01435 Sorghum extracellular, golgi, plasma membrane 63.28 61.55
EES19843 Sorghum golgi 61.77 60.21
EES14846 Sorghum golgi 60.69 60.17
EES18546 Sorghum cytosol, golgi, plastid 58.32 56.49
VIT_18s0041g01010.t01 Wine grape cytosol 17.06 54.86
EES01428 Sorghum golgi 53.78 53.66
EES17304 Sorghum cytosol, golgi 53.56 51.77
EES19849 Sorghum golgi, peroxisome, plastid 53.13 51.68
EES01437 Sorghum golgi, mitochondrion 52.92 51.47
VIT_16s0050g01670.t01 Wine grape cytosol 31.97 51.03
KXG22388 Sorghum extracellular, golgi, plastid 46.22 49.65
EES19846 Sorghum extracellular, golgi 49.68 48.02
EES19844 Sorghum extracellular, golgi 49.89 47.14
GSMUA_Achr7P24760_001 Banana extracellular, golgi 37.15 46.99
EES19845 Sorghum golgi 47.95 46.64
VIT_18s0041g00980.t01 Wine grape cytosol 29.81 46.31
VIT_18s0041g00930.t01 Wine grape cytosol, peroxisome, plastid 31.53 46.2
KXG33315 Sorghum cytosol, golgi, plastid 48.38 46.0
VIT_16s0050g01580.t01 Wine grape cytosol, golgi, plastid 47.3 45.72
VIT_16s0050g01590.t01 Wine grape cytosol, golgi, plastid 46.65 45.28
KXG36471 Sorghum endoplasmic reticulum, golgi 50.11 45.22
EER99533 Sorghum golgi 49.68 44.83
OQU92623 Sorghum cytosol, golgi, plastid 46.65 44.72
VIT_16s0050g01610.t01 Wine grape cytosol, endoplasmic reticulum, golgi, plastid 45.36 44.68
EES01430 Sorghum cytosol 46.44 44.61
EES03482 Sorghum cytosol, endoplasmic reticulum, golgi 46.22 44.58
GSMUA_Achr4P10400_001 Banana plasma membrane 37.37 44.02
VIT_16s0050g01660.t01 Wine grape cytosol, endoplasmic reticulum, golgi 45.14 43.82
KXG33360 Sorghum cytosol 45.79 43.8
GSMUA_Achr4P10410_001 Banana extracellular, golgi, plastid 38.88 43.69
VIT_16s0050g01680.t01 Wine grape plastid 44.71 43.49
VIT_00s2707g00010.t01 Wine grape cytosol 8.64 43.48
VIT_00s1602g00010.t01 Wine grape cytosol 8.64 43.48
CDY43105 Canola cytosol 41.68 41.59
EES03574 Sorghum golgi, peroxisome 42.12 41.14
CDX92078 Canola cytosol 41.04 40.95
KRH08809 Soybean cytosol, golgi, plasma membrane 42.76 40.91
VIT_18s0041g00710.t01 Wine grape cytosol, golgi, plastid 41.47 40.34
VIT_18s0041g00740.t01 Wine grape cytosol, golgi, plastid 41.68 40.21
KRH38327 Soybean endoplasmic reticulum, golgi, plastid 41.9 40.17
KRH38326 Soybean endoplasmic reticulum, golgi, plastid 38.66 39.69
VIT_18s0041g00950.t01 Wine grape cytosol 41.25 39.54
AT3G16520.3 Thale cress cytosol 39.31 39.39
VIT_18s0041g00910.t01 Wine grape cytosol, golgi, plastid 41.04 39.34
VIT_18s0041g00840.t01 Wine grape cytosol, golgi, plastid 41.04 39.34
VIT_18s0041g00920.t01 Wine grape cytosol 41.04 39.34
VIT_18s0041g01080.t01 Wine grape cytosol 40.82 39.13
KRH08802 Soybean endoplasmic reticulum, golgi, plastid 38.88 39.13
VIT_18s0041g01040.t01 Wine grape cytosol 40.82 39.13
VIT_18s0041g01000.t01 Wine grape cytosol, golgi, plastid 40.6 38.92
VIT_16s0115g00340.t01 Wine grape cytosol, golgi, plastid 39.74 38.9
KRH38315 Soybean golgi, plasma membrane, plastid 39.31 38.89
VIT_16s0050g01600.t01 Wine grape extracellular, golgi, plastid 39.09 38.68
KRH08803 Soybean extracellular, golgi, plastid 39.31 38.48
VIT_16s0050g00240.t01 Wine grape cytosol 38.88 38.46
KRH08801 Soybean nucleus 38.88 38.22
VIT_18s0041g00810.t01 Wine grape cytosol, golgi, plastid 36.29 37.92
VIT_18s0041g00900.t01 Wine grape cytosol 39.09 37.87
KRH08808 Soybean cytosol, golgi, plastid 38.66 37.84
VIT_18s0041g00830.t01 Wine grape cytosol, golgi, plastid 40.39 37.78
KRH38320 Soybean golgi, plasma membrane, plastid 38.44 37.63
KRH08805 Soybean cytosol, golgi, plastid 38.01 37.13
VIT_18s0041g00790.t01 Wine grape cytosol, golgi, plastid 38.66 36.91
KRH38316 Soybean cytosol, golgi, plastid 36.07 36.87
KRH56380 Soybean cytosol, golgi, peroxisome 38.01 36.59
KRH08804 Soybean extracellular, golgi, plastid 37.15 36.29
OQU77629 Sorghum cytosol 27.65 36.06
KXG29900 Sorghum plastid 38.23 35.05
EER98757 Sorghum plastid 34.99 33.75
EES06270 Sorghum cytosol 35.64 33.54
KXG29899 Sorghum cytosol 36.07 33.2
EES08692 Sorghum plastid 33.91 32.71
OQU76647 Sorghum plastid 33.48 32.02
EES08777 Sorghum plastid 32.18 31.84
EES01087 Sorghum cytosol, golgi, plastid 33.05 31.1
EES10040 Sorghum cytosol, peroxisome, plastid 32.61 30.38
EES09959 Sorghum plastid 25.05 28.16
Protein Annotations
Gene3D:3.40.50.2000MapMan:50.2.4EntrezGene:8062148UniProt:C5XJ52EnsemblPlants:EES01436ProteinID:EES01436
ProteinID:EES01436.1GO:GO:0003674GO:GO:0003824GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0008150GO:GO:0008152GO:GO:0016740GO:GO:0016757GO:GO:0016758GO:GO:0043231
GO:GO:0080043GO:GO:0080044PFAM:PF00201ScanProsite:PS00375PANTHER:PTHR11926PANTHER:PTHR11926:SF278
EnsemblPlantsGene:SORBI_3003G288000SUPFAM:SSF53756InterPro:UDP_glucos_transInterPro:UDP_glycos_trans_CSUniParc:UPI0001A8491ERefSeq:XP_002456316.1
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr3:+:62117992..62119804
Molecular Weight (calculated)
50221.9 Da
IEP (calculated)
6.104
GRAVY (calculated)
0.018
Length
463 amino acids
Sequence
(BLAST)
001: MTEKTVVLYP SLGVGHLNPM AQLAKAILRH GGVAVTIAVV DPPEKHAVLA AALARLAVVS PSITVHLLPI PPCASSNQHS HPIKPILDAL RAANPALRAF
101: LASRVPAVDA LVVDMFCTDA LDVAAELGIP AYFFYPSAAG DLAVYLQIPD LFRAVPPSPK DMGKAVLNFA GVPAVRALDM PDTMQDWESD VGSVRLRQLA
201: RMPEAAGVLV NSFEWLESRA LKALRDGDCL PGRSTPKIYC VGPLVDGGDA EGNGERHACL EWMDGQPRQS VVFLCFGSLG AFPAAQLKET ARGLERCGHR
301: FLWAVRSREQ SSREPDLEAL LPDGFLERTR GRGLVLKNWA PQTQVLRHEA VGAFVTHCGW NSVLEAVMSG VPMICWPLYA EQRLNKVHVV EEMKLGVVME
401: GYEEETVTAD EVEAKVRLVM ESEEGKKLRE RTAMAKEMAA DAMKESGSSH VELGEFLRGL GSK
Best Arabidopsis Sequence Match ( AT3G16520.3 )
(BLAST)
001: MGEEAIVLYP APPIGHLVSM VELGKTILSK NPSLSIHIIL VPPPYQPEST ATYISSVSSS FPSITFHHLP AVTPYSSSST SRHHHESLLL EILCFSNPSV
101: HRTLFSLSRN FNVRAMIIDF FCTAVLDITA DFTFPVYFFY TSGAACLAFS FYLPTIDETT PGKNLKDIPT VHIPGVPPMK GSDMPKAVLE RDDEVYDVFI
201: MFGKQLSKSS GIIINTFDAL ENRAIKAITE ELCFRNIYPI GPLIVNGRIE DRNDNKAVSC LNWLDSQPEK SVVFLCFGSL GLFSKEQVIE IAVGLEKSGQ
301: RFLWVVRNPP ELEKTELDLK SLLPEGFLSR TEDKGMVVKS WAPQVPVLNH KAVGGFVTHC GWNSILEAVC AGVPMVAWPL YAEQRFNRVM IVDEIKIAIS
401: MNESETGFVS STEVEKRVQE IIGECPVRER TMAMKNAAEL ALTETGSSHT ALTTLLQSWS PK
Arabidopsis Description
UGT88A1UDP-glycosyltransferase 88A1 [Source:UniProtKB/Swiss-Prot;Acc:Q9LK73]
SUBAcon: [cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.