Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- mitochondrion 1
- endoplasmic reticulum 2
- extracellular 1
- vacuole 1
- plasma membrane 2
- golgi 1
- plastid 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 52.33 | 79.35 |
| GSMUA_Achr1P20990_001 | Banana | nucleus | 53.05 | 69.48 |
| KRH41646 | Soybean | nucleus | 19.71 | 39.29 |
| PGSC0003DMT400014370 | Potato | nucleus, plastid | 20.43 | 35.19 |
| KRH48492 | Soybean | plastid | 30.11 | 34.01 |
| Solyc03g119410.1.1 | Tomato | plastid | 18.28 | 33.77 |
| KRH39177 | Soybean | plastid | 27.6 | 31.69 |
| CDY18516 | Canola | nucleus | 24.73 | 25.18 |
| Bra037588.1-P | Field mustard | nucleus | 24.73 | 24.04 |
| PGSC0003DMT400074049 | Potato | plastid | 26.52 | 24.03 |
| CDX95531 | Canola | nucleus | 24.01 | 23.93 |
| AT3G18360.1 | Thale cress | nucleus | 24.37 | 23.86 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P13220_001 | EnsemblPlants:GSMUA_Achr11T13220_001 | EnsemblPlantsGene:GSMUA_Achr11G13220_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:VQ | PANTHER:PTHR33143 | PANTHER:PTHR33143:SF11 | PFAM:PF05678 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002959F1F | UniProt:M0RRV2 | MapMan:35.2 | : | : | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr11G13220_001]
Coordinates
chr11:-:13357098..13357937
Molecular Weight (calculated)
30451.5 Da
IEP (calculated)
7.776
GRAVY (calculated)
-0.275
Length
279 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHFPSPPTT NRANQSPFQF YIKFIYVPLF LLFFFILLTP SILSLSLSSL FLLPLHYYNM SSVSREINGS RPAPLKIHKD SHLIHKASSS SSSSSSTSTS
101: TTTTTTSSHQ QQRHHPVIIY THSPKVIHTQ ARDFMALVQK LTGLSRSAAD DDSSSLPPAP SQSKTSRKHK DDNRAAASAS DDSSSSSENC SSFGGDVHVS
201: CSSLATVGAI SPISLEQLPP LNPFLSEMPL FTPNSSDIFC SSRSFYRYPD PSLFSPSVPN VDNAISPSVM DAPNTYHEY
101: TTTTTTSSHQ QQRHHPVIIY THSPKVIHTQ ARDFMALVQK LTGLSRSAAD DDSSSLPPAP SQSKTSRKHK DDNRAAASAS DDSSSSSENC SSFGGDVHVS
201: CSSLATVGAI SPISLEQLPP LNPFLSEMPL FTPNSSDIFC SSRSFYRYPD PSLFSPSVPN VDNAISPSVM DAPNTYHEY
001: MIPTRCNEIN GSRPSSLKLA GESHTIKKTS SCKSKPRPHG RASPVIIYAH SPKVIHTRAE DFMALVQRLT GLDEIIRRNT SESSSSVVTE EVNVGDDNTA
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
Arabidopsis Description
VQ8VQ motif-containing protein 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.