Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- plastid 3
- cytosol 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | nucleus | 62.91 | 72.83 |
| GSMUA_Achr11P... | Banana | plastid | 69.48 | 53.05 |
| KRH41646 | Soybean | nucleus | 25.35 | 38.57 |
| PGSC0003DMT400014370 | Potato | nucleus, plastid | 28.17 | 37.04 |
| Solyc03g119410.1.1 | Tomato | plastid | 25.35 | 35.76 |
| KRH48492 | Soybean | plastid | 38.97 | 33.6 |
| KRH39177 | Soybean | plastid | 37.56 | 32.92 |
| CDY18516 | Canola | nucleus | 32.39 | 25.18 |
| CDX95531 | Canola | nucleus | 32.39 | 24.64 |
| AT3G18360.1 | Thale cress | nucleus | 32.39 | 24.21 |
| Bra037588.1-P | Field mustard | nucleus | 32.39 | 24.04 |
| PGSC0003DMT400074049 | Potato | plastid | 31.92 | 22.08 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr1P20990_001 | EnsemblPlants:GSMUA_Achr1T20990_001 | EnsemblPlantsGene:GSMUA_Achr1G20990_001 | InterPro:VQ | PANTHER:PTHR33143 | PANTHER:PTHR33143:SF11 |
| PFAM:PF05678 | SEG:seg | UniParc:UPI000295DE79 | UniProt:M0S1Q7 | MapMan:35.2 | : |
Description
Putative uncharacterized protein [Source:GMGC_GENE;Acc:GSMUA_Achr1G20990_001]
Coordinates
chr1:+:15811157..15812051
Molecular Weight (calculated)
22899.5 Da
IEP (calculated)
7.168
GRAVY (calculated)
-0.477
Length
213 amino acids
Sequence
(BLAST)
(BLAST)
001: MSPSSREIHG SRPAPLKIHK DSHLIHKASS SSSSSSTTTN ASSQQQQRHR PVIIYTHSPK VIHTQAHDFM ALVQKLTGLS RSTNDDISSS LPPAPPAANA
101: SRLHKDSNRA AVSASDDSSS SSENSSLGGD VHVTCSSLTS VGAISPIAFE PLPPPNPFFS EIPMFTPTSE DFICSSMPFY RYPDSSMLSP SIHNMGSAIS
201: PPYTDAMKTY HEY
101: SRLHKDSNRA AVSASDDSSS SSENSSLGGD VHVTCSSLTS VGAISPIAFE PLPPPNPFFS EIPMFTPTSE DFICSSMPFY RYPDSSMLSP SIHNMGSAIS
201: PPYTDAMKTY HEY
001: MIPTRCNEIN GSRPSSLKLA GESHTIKKTS SCKSKPRPHG RASPVIIYAH SPKVIHTRAE DFMALVQRLT GLDEIIRRNT SESSSSVVTE EVNVGDDNTA
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
101: APFSQDRTQR QKLTDMPLFT PSSMTLFGSP TQLMYMSPNR TDSFRPLVFK SE
Arabidopsis Description
VQ8VQ motif-containing protein 8, chloroplastic [Source:UniProtKB/Swiss-Prot;Acc:Q9CA36]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.