Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr5P17230_001 | Banana | cytosol | 42.23 | 75.24 |
| HORVU2Hr1G046270.1 | Barley | cytosol | 30.25 | 70.7 |
| VIT_14s0171g00450.t01 | Wine grape | nucleus | 67.3 | 65.34 |
| TraesCS2B01G363200.2 | Wheat | nucleus | 58.58 | 59.56 |
| HORVU2Hr1G084030.2 | Barley | cytosol | 57.77 | 58.73 |
| TraesCS2A01G320100.1 | Wheat | nucleus | 57.22 | 58.17 |
| Zm00001d025720_P002 | Maize | nucleus | 58.86 | 56.99 |
| TraesCS2D01G343200.1 | Wheat | nucleus | 44.69 | 56.36 |
| EES11021 | Sorghum | nucleus | 58.58 | 56.28 |
| GSMUA_Achr5P17240_001 | Banana | nucleus | 29.16 | 49.08 |
| GSMUA_Achr8P21100_001 | Banana | nucleus | 12.26 | 22.06 |
| GSMUA_Achr7P04840_001 | Banana | nucleus | 15.53 | 18.75 |
| GSMUA_AchrUn_... | Banana | nucleus | 9.81 | 16.36 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr3P19370_001 | EnsemblPlants:GSMUA_Achr3T19370_001 | EnsemblPlantsGene:GSMUA_Achr3G19370_001 | Gene3D:1.10.10.60 | InterPro:IPR017877 | InterPro:Myb-like_dom |
| InterPro:SANT/Myb | PANTHER:PTHR45169 | PFAM:PF13837 | PFscan:PS50090 | SEG:seg | SMART:SM00717 |
| UniParc:UPI0002948CB7 | UniProt:M0SG03 | MapMan:15.5.20 | : | : | : |
Description
MYB family transcription factor, putative, expressed [Source:GMGC_GENE;Acc:GSMUA_Achr3G19370_001]
Coordinates
chr3:-:20726675..20732994
Molecular Weight (calculated)
41955.2 Da
IEP (calculated)
7.030
GRAVY (calculated)
-0.861
Length
367 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLAEKPRNV DFYDTGGLPP QQQQQQQHPQ QQMHLAESSG DDHEVKAPKK RAETWAQEET RSLISFRREI DGLFNTSKSN KHLWEQISAK MREKGFDRSP
101: TMCTDKWRNL LKEFKKAKHQ SKGSGLGKMS YYKELDELLK ERNKKATFKS SGAPKIDTFL HFSDKGLEDA NTPFGSVEAS GRSPLNLDRP MEHDRHPLAI
201: TAVDAVAANS VPPWNWRDAS VNDNNASYGG RVILVKWEDY SRRIGIDGTA EAIKEAIKSA FGLRTKRAFW LEDEDNVVRS LDRDMPLGSY TLHLDEGITI
301: KACTYDDTDR MPVRTEEKTL YTEDDLRDFL SRRGWVGLRE LSGFKNVDTL DDLRSGAMYQ GVRSLID
101: TMCTDKWRNL LKEFKKAKHQ SKGSGLGKMS YYKELDELLK ERNKKATFKS SGAPKIDTFL HFSDKGLEDA NTPFGSVEAS GRSPLNLDRP MEHDRHPLAI
201: TAVDAVAANS VPPWNWRDAS VNDNNASYGG RVILVKWEDY SRRIGIDGTA EAIKEAIKSA FGLRTKRAFW LEDEDNVVRS LDRDMPLGSY TLHLDEGITI
301: KACTYDDTDR MPVRTEEKTL YTEDDLRDFL SRRGWVGLRE LSGFKNVDTL DDLRSGAMYQ GVRSLID
001: MFISDKSRPT DFYKDDHHNS STTSTTRDMM IDVLTTTNES VDLQSHHHHN HHNHHLHQSQ PQQQILLGES SGEDHEVKAP KKRAETWVQD ETRSLIMFRR
101: GMDGLFNTSK SNKHLWEQIS SKMREKGFDR SPTMCTDKWR NLLKEFKKAK HHDRGNGSAK MSYYKEIEDI LRERSKKVTP PQYNKSPNTP PTSAKVDSFM
201: QFTDKGFDDT SISFGSVEAN GRPALNLERR LDHDGHPLAI TTAVDAVAAN GVTPWNWRET PGNGDDSHGQ PFGGRVITVK FGDYTRRIGV DGSAEAIKEV
301: IRSAFGLRTR RAFWLEDEDQ IIRCLDRDMP LGNYLLRLDD GLAIRVCHYD ESNQLPVHSE EKIFYTEEDY REFLARQGWS SLQVDGFRNI ENMDDLQPGA
401: VYRGVR
101: GMDGLFNTSK SNKHLWEQIS SKMREKGFDR SPTMCTDKWR NLLKEFKKAK HHDRGNGSAK MSYYKEIEDI LRERSKKVTP PQYNKSPNTP PTSAKVDSFM
201: QFTDKGFDDT SISFGSVEAN GRPALNLERR LDHDGHPLAI TTAVDAVAAN GVTPWNWRET PGNGDDSHGQ PFGGRVITVK FGDYTRRIGV DGSAEAIKEV
301: IRSAFGLRTR RAFWLEDEDQ IIRCLDRDMP LGNYLLRLDD GLAIRVCHYD ESNQLPVHSE EKIFYTEEDY REFLARQGWS SLQVDGFRNI ENMDDLQPGA
401: VYRGVR
Arabidopsis Description
GT-1Trihelix transcription factor GT-1 [Source:UniProtKB/Swiss-Prot;Acc:Q9FX53]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.