Factsheet for GSMUA_Achr3P28470_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, cytosol

Predictor Summary:

cytosol 3
mitochondrion 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr11P...	Banana	mitochondrion	69.01	70.25
GSMUA_Achr3P03760_001	Banana	cytosol	68.66	68.9
GSMUA_Achr9P12400_001	Banana	cytosol	68.66	67.94
GSMUA_Achr3P11750_001	Banana	cytosol	63.73	67.54
Os08t0510400-01	Rice	plastid	65.85	65.85
TraesCS7D01G245700.1	Wheat	cytosol	65.49	65.72
Zm00001d031453_P001	Maize	cytosol	64.79	65.71
EES14264	Sorghum	cytosol, plastid	64.44	65.59
TraesCS7A01G246900.1	Wheat	plastid	65.14	65.37
TraesCS7B01G144400.1	Wheat	cytosol	64.79	65.02
TraesCS7A01G427800.1	Wheat	mitochondrion	63.03	64.16
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	60.56	61.65
TraesCS2D01G531000.1	Wheat	plastid	59.51	60.57
HORVU7Hr1G050760.2	Barley	vacuole	64.08	58.33
GSMUA_Achr3P03770_001	Banana	cytosol	10.92	54.39
HORVU2Hr1G116450.1	Barley	plastid	59.86	53.63
GSMUA_Achr8P17860_001	Banana	cytosol	18.31	29.21
GSMUA_Achr4P16020_001	Banana	cytosol	26.06	27.82
GSMUA_Achr8P17880_001	Banana	cytosol	9.15	24.76

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr3G28470_001	EnsemblPlants:GSMUA_Achr3P28470_001	EnsemblPlants:GSMUA_Achr3T28470_001	UniProt:M0SIL3
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR44375
PANTHER:PTHR44375:SF2	InterPro:SDR_fam	SMART:SM00822	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00029489E8
SEG:seg	:	:	:	:	:

Description

Putative 3-oxoacyl-[acyl-carrier-protein] reductase [Source:GMGC_GENE;Acc:GSMUA_Achr3G28470_001]

Coordinates

chr3:-:27760973..27763813

Molecular Weight (calculated)

30328.7 Da

IEP (calculated)

9.681

GRAVY (calculated)

0.131

Length

284 amino acids

Sequence
(BLAST)

001: MDRPPWRRLE GKVVMVTGAS SGIGREICLD LAAAGCRVVA TARRIDRLRS LCDEIDGPGS PLPPPSSSFS ARSAARSVAV ELDVSAGGSV IEAAVQRAWD
101: AFGRIDALIN NAGVRGGVYS PLDWPEEDWN ATFATNLTGL WLVSKYVCKQ MVNAKLKGTV INISSISGLN RGKLPGAIAY AVSKEGVNAI TKVMALEMGV
201: HNIRVNSISP GIFKSEITES LMRKKWINKV ATKIIPLRTF GTSDPAITSV VRYLIHDSSE YVTGNIFIVD AGATLPGVPI FSSL

Best Arabidopsis Sequence Match ( AT3G55290.1 )
(BLAST)

001: MSNHQTQVLK LLEPWCELKD KVVLVTGASS GIGREICLDL AKAGCQVIAA ARRVDRLNSL CSEINSFSST GIQAAALELD VSSDAATIQK AVREAWDIFG
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.