Factsheet for Os08t0510400-01

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 6
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	nucleus, plastid
BaCelLo:	plastid
MultiLoc:	plastid
Plant-mPloc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	plastid

PPI

Inferred distinct locusB in Crop

locusB	locations
Os09t0498600-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55290.1	Os09t0498600-01	AT1G51580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES14264	Sorghum	cytosol, plastid	81.34	82.8
Zm00001d031453_P001	Maize	cytosol	80.63	81.79
TraesCS7D01G245700.1	Wheat	cytosol	81.34	81.63
TraesCS7A01G246900.1	Wheat	plastid	80.63	80.92
TraesCS7B01G144400.1	Wheat	cytosol	80.28	80.57
TraesCS7A01G427800.1	Wheat	mitochondrion	76.41	77.78
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	75.0	76.34
TraesCS2D01G531000.1	Wheat	plastid	73.24	74.55
HORVU7Hr1G050760.2	Barley	vacuole	81.34	74.04
HORVU2Hr1G116450.1	Barley	plastid	73.59	65.93
GSMUA_Achr3P28470_001	Banana	cytosol, mitochondrion	65.85	65.85
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	30.99	65.19
KRH71588	Soybean	cytosol	64.44	64.89
CDY07809	Canola	plastid	33.8	64.86
PGSC0003DMT400088158	Potato	cytosol	58.1	64.2
VIT_08s0040g01200.t01	Wine grape	cytosol	64.44	63.99
PGSC0003DMT400014256	Potato	cytosol, nucleus, plastid	25.0	63.96
GSMUA_Achr11P...	Banana	mitochondrion	62.68	63.8
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	20.42	63.74
GSMUA_Achr3P03760_001	Banana	cytosol	63.38	63.6
Bra024488.1-P	Field mustard	plastid	33.1	63.51
CDY29207	Canola	plastid	33.1	63.51
VIT_08s0040g01190.t01	Wine grape	cytosol	63.73	63.29
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	51.06	63.04
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	59.86	62.73
PGSC0003DMT400018472	Potato	cytosol	60.56	62.32
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	59.15	62.22
PGSC0003DMT400072205	Potato	cytosol	63.38	62.07
GSMUA_Achr9P12400_001	Banana	cytosol	62.68	62.02
PGSC0003DMT400062814	Potato	cytosol	21.83	62.0
Solyc12g100220.1.1	Tomato	plastid	59.15	61.99
GSMUA_Achr3P11750_001	Banana	cytosol	58.45	61.94
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	59.15	61.76
KRH71621	Soybean	cytosol	61.27	61.7
AT3G55290.1	Thale cress	cytosol	60.56	61.43
Solyc10g080890.1.1	Tomato	cytosol	62.68	61.38
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	58.1	61.11
AT1G62610.4	Thale cress	cytosol, nucleus, peroxisome	60.56	60.99
Solyc10g006860.2.1	Tomato	plastid	59.15	60.87
AT3G55310.1	Thale cress	cytosol	58.8	59.86
Solyc10g080900.1.1	Tomato	plastid	60.21	59.58
Solyc10g078360.1.1	Tomato	cytosol	60.92	59.45
Solyc12g045030.1.1	Tomato	nucleus	56.69	59.41
Bra002097.1-P	Field mustard	cytosol	58.1	59.35
CDY29203	Canola	cytosol	58.1	59.35
Bra040871.1-P	Field mustard	cytosol	58.1	59.35
CDY03343	Canola	cytosol, nucleus, peroxisome	58.45	59.29
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	56.34	59.04
Bra014762.1-P	Field mustard	cytosol	58.1	58.93
Solyc12g100280.1.1	Tomato	cytosol	26.76	58.91
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	55.99	58.67
CDY07814	Canola	cytosol	57.39	58.63
AT1G63380.2	Thale cress	cytosol	59.15	58.54
Solyc12g044940.1.1	Tomato	nucleus	55.63	58.3
CDX76107	Canola	cytosol, nucleus, peroxisome	57.39	58.21
Bra014757.1-P	Field mustard	cytosol	57.39	58.21
CDX73333	Canola	cytosol, nucleus, peroxisome	57.04	57.86
Bra014760.1-P	Field mustard	plastid	46.83	57.83
CDY65313	Canola	cytosol, nucleus, peroxisome	57.39	57.8
CDY48725	Canola	cytosol, peroxisome, plastid	58.1	57.49
CDY44938	Canola	cytosol, peroxisome, plastid	57.39	57.39
AT3G46170.1	Thale cress	cytosol, extracellular, peroxisome	58.1	57.29
Bra036706.1-P	Field mustard	cytosol	57.75	57.14
Bra014761.1-P	Field mustard	cytosol	50.0	55.91
PGSC0003DMT400021572	Potato	cytosol, mitochondrion	24.3	55.65
CDY40209	Canola	peroxisome	59.15	53.85
PGSC0003DMT400021571	Potato	cytosol	32.75	53.45
CDY02920	Canola	cytosol	44.37	53.16
AT2G17845.1	Thale cress	golgi, peroxisome, plastid	57.75	52.56
VIT_08s0040g01210.t01	Wine grape	cytosol	47.18	47.35
Solyc12g036510.1.1	Tomato	cytosol	38.03	45.76
KRH76339	Soybean	cytosol	17.96	45.13
Bra007151.1-P	Field mustard	cytosol	58.8	37.28
CDX73391	Canola	cytosol	60.21	36.46
CDX91138	Canola	cytosol, plastid	16.2	28.57
Os03t0850000-01	Rice	cytosol	25.35	25.99

Protein Annotations

EMBL:AK069393	EnsemblPlants:Os08t0510400-01	EnsemblPlantsGene:Os08g0510400	EntrezGene:4346000	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf
InterPro:SDR_fam	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
ProteinID:BAC57400.1	ProteinID:BAF24120.1	ProteinID:BAT06192.1	RefSeq:XP_015648209.1	SEG:seg	SMART:SM00822
SUPFAM:SSF51735	UniParc:UPI00000047F4	UniProt:Q84YJ8	MapMan:35.1	:	:

Description

Short-chain dehydrogenase/reductase SDR domain containing protein. (Os08t0510400-01)

Coordinates

chr8:-:25319041..25320717

Molecular Weight (calculated)

29854.9 Da

IEP (calculated)

9.247

GRAVY (calculated)

0.158

Length

284 amino acids

Sequence
(BLAST)

001: MASSSRPEEA AAAAPPWSRL EGRVVLVTGA SSGLGREFCL DLARAGCLVV AAARRADRLR SLCDEINASA PRASAAAAAV ELDVASGGPA LEAAVQSAWD
101: AFGRIDVLIN NAGLRGGVHS PLDWPEDEWE TLIKTNLTGS WLVAKHVCRR MRDAKLKGSV INISSVSGLN RGHLPGSTGY AASKSAMHYA TKLMALELGA
201: YGIRVNSIAP GIFKSEITAP LLQKKWLSTV VSKIVPLKTH GTTDPALTSL VRFLIHETSS YVTGNIFIVD SGATLPGVPI FSSL

Best Arabidopsis Sequence Match ( AT3G55290.1 )
(BLAST)

001: MSNHQTQVLK LLEPWCELKD KVVLVTGASS GIGREICLDL AKAGCQVIAA ARRVDRLNSL CSEINSFSST GIQAAALELD VSSDAATIQK AVREAWDIFG
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.