Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014762.1-P | Field mustard | cytosol | 84.81 | 71.79 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 83.97 | 71.07 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 82.7 | 69.01 |
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 80.59 | 68.21 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 78.48 | 65.96 |
| CDY29203 | Canola | cytosol | 72.15 | 61.51 |
| CDY07814 | Canola | cytosol | 71.73 | 61.15 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 69.2 | 58.57 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 69.62 | 57.49 |
| CDY40209 | Canola | peroxisome | 70.04 | 53.21 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 67.09 | 50.96 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 56.96 | 49.82 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 55.7 | 48.89 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 55.27 | 48.52 |
| Solyc12g045030.1.1 | Tomato | nucleus | 54.43 | 47.6 |
| PGSC0003DMT400072205 | Potato | cytosol | 57.81 | 47.24 |
| Solyc12g100220.1.1 | Tomato | plastid | 54.01 | 47.23 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 54.01 | 47.23 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 45.57 | 46.96 |
| Solyc10g080890.1.1 | Tomato | cytosol | 57.38 | 46.9 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 56.12 | 46.5 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 53.16 | 46.32 |
| PGSC0003DMT400088158 | Potato | cytosol | 50.21 | 46.3 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 55.7 | 46.15 |
| Solyc12g044940.1.1 | Tomato | nucleus | 52.32 | 45.76 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 52.32 | 45.76 |
| KRH71588 | Soybean | cytosol | 54.01 | 45.39 |
| KRH71621 | Soybean | cytosol | 54.01 | 45.39 |
| Solyc10g080900.1.1 | Tomato | plastid | 54.43 | 44.95 |
| Os08t0510400-01 | Rice | plastid | 53.16 | 44.37 |
| Solyc10g006860.2.1 | Tomato | plastid | 51.48 | 44.2 |
| Zm00001d031453_P001 | Maize | cytosol | 51.48 | 43.57 |
| EES14264 | Sorghum | cytosol, plastid | 50.63 | 43.01 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 50.21 | 42.65 |
| CDY29207 | Canola | plastid | 26.58 | 42.57 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 50.63 | 42.4 |
| TraesCS2D01G531000.1 | Wheat | plastid | 49.79 | 42.29 |
| TraesCS7A01G246900.1 | Wheat | plastid | 50.21 | 42.05 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 49.37 | 41.94 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 49.79 | 41.7 |
| CDY07809 | Canola | plastid | 25.74 | 41.22 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 15.19 | 39.56 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 51.05 | 38.78 |
| HORVU2Hr1G116450.1 | Barley | plastid | 49.79 | 37.22 |
| CDX73391 | Canola | cytosol | 70.46 | 35.61 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 42.19 | 35.34 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 19.41 | 34.07 |
| CDX91138 | Canola | cytosol, plastid | 22.36 | 32.92 |
| Solyc12g036510.1.1 | Tomato | cytosol | 32.49 | 32.63 |
| PGSC0003DMT400062814 | Potato | cytosol | 11.81 | 28.0 |
| KRH76339 | Soybean | cytosol | 12.24 | 25.66 |
| CDY02527 | Canola | cytosol | 21.94 | 19.77 |
| CDY65036 | Canola | cytosol | 21.94 | 19.77 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 13.08 | 12.7 |
Protein Annotations
| EnsemblPlants:CDY02920 | EnsemblPlantsGene:GSBRNA2T00115182001 | Gene3D:3.40.50.720 | GO:A0A078ELM9 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | PFAM:PF00106 | PRINTS:PR00081 | ProteinID:CDY02920 | ProteinID:CDY02920.1 |
| SUPFAM:SSF51735 | UniParc:UPI0004EF3B3C | MapMan:35.1 | : | : | : |
Description
BnaC04g25660D
Coordinates
chrLK031938:-:510394..516329
Molecular Weight (calculated)
26144.8 Da
IEP (calculated)
8.366
GRAVY (calculated)
0.134
Length
237 amino acids
Sequence
(BLAST)
(BLAST)
001: MGENQVLNQL EPWSELKDKV VLLTGASSGI GREVCLDLDK AGCKIIAAAR RVDRLEFLCS EINSLSSTGI MLAAPFELDV SSDAATIQKA VKQAWDIFGK
101: IDVLINNAGI RSNVKTCLDL SEDEWDRVFR TNLTGAWLVS KYVCSLMRDA KRGGSVINRS LVSIQIRLVH RRSPPLYVTH WSRICLTIPL KVQQTVDLGI
201: TSLVRYLIHD SSRYVSGNIY ILDSGATIPG LPIISSL
101: IDVLINNAGI RSNVKTCLDL SEDEWDRVFR TNLTGAWLVS KYVCSLMRDA KRGGSVINRS LVSIQIRLVH RRSPPLYVTH WSRICLTIPL KVQQTVDLGI
201: TSLVRYLIHD SSRYVSGNIY ILDSGATIPG LPIISSL
001: MQKQVLKQLE PWCELKDKVV LVTGASSGIG REICLDLCKA GCKIVAAARR VDRLNSLCSE INSFGAIGVQ AAALELDVSS DADTIRKAVK EAWEIFGTID
101: VLINNAGIRG NVKSSLDLSK EEWDKVFRTN LTGSWLISKY VCLLMRDAKR GGSVINVSSI SGLHRGLLRG GLAYACSKGG VDTMTRMMAI ELAVYKIRVN
201: SIAPGIFRSE ITQGLFQKEW LEKVTEKIVP LKMQQTVDPG LTSLVRYLIH DSSQYVTGNT YIVDSGATLP GVPIFSSL
101: VLINNAGIRG NVKSSLDLSK EEWDKVFRTN LTGSWLISKY VCLLMRDAKR GGSVINVSSI SGLHRGLLRG GLAYACSKGG VDTMTRMMAI ELAVYKIRVN
201: SIAPGIFRSE ITQGLFQKEW LEKVTEKIVP LKMQQTVDPG LTSLVRYLIH DSSQYVTGNT YIVDSGATLP GVPIFSSL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [cytosol,peroxisome,plastid]
SUBAcon: [cytosol,peroxisome,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.