Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- plastid 1
- peroxisome 2
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 71.47 | 79.64 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 71.79 | 79.43 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 71.15 | 79.29 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 71.15 | 78.17 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 69.87 | 77.86 |
| CDY29203 | Canola | cytosol | 66.99 | 75.18 |
| CDY07814 | Canola | cytosol | 66.35 | 74.46 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 67.95 | 73.87 |
| CDY07809 | Canola | plastid | 34.29 | 72.3 |
| CDY29207 | Canola | plastid | 33.97 | 71.62 |
| CDY02920 | Canola | cytosol | 53.21 | 70.04 |
| Bra007151.1-P | Field mustard | cytosol | 95.51 | 66.52 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 57.37 | 66.05 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 65.38 | 65.38 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 47.76 | 64.78 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 27.88 | 64.44 |
| Solyc12g100220.1.1 | Tomato | plastid | 55.77 | 64.21 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 18.59 | 63.74 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 55.13 | 63.7 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 54.81 | 62.87 |
| PGSC0003DMT400072205 | Potato | cytosol | 58.01 | 62.41 |
| PGSC0003DMT400088158 | Potato | cytosol | 51.28 | 62.26 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 53.85 | 62.22 |
| CDX73391 | Canola | cytosol | 92.63 | 61.62 |
| Solyc10g080890.1.1 | Tomato | cytosol | 57.05 | 61.38 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 56.09 | 61.19 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 56.09 | 61.19 |
| Solyc10g080900.1.1 | Tomato | plastid | 56.09 | 60.98 |
| Solyc12g045030.1.1 | Tomato | nucleus | 52.88 | 60.89 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 52.56 | 60.52 |
| Solyc10g006860.2.1 | Tomato | plastid | 52.88 | 59.78 |
| KRH71588 | Soybean | cytosol | 53.85 | 59.57 |
| Os08t0510400-01 | Rice | plastid | 53.85 | 59.15 |
| Solyc12g044940.1.1 | Tomato | nucleus | 51.28 | 59.04 |
| KRH71621 | Soybean | cytosol | 53.21 | 58.87 |
| PGSC0003DMT400062814 | Potato | cytosol | 18.59 | 58.0 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 50.32 | 57.93 |
| EES14264 | Sorghum | cytosol, plastid | 51.6 | 57.71 |
| Zm00001d031453_P001 | Maize | cytosol | 51.6 | 57.5 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 50.64 | 56.63 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 51.28 | 56.54 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 50.0 | 55.91 |
| TraesCS7A01G246900.1 | Wheat | plastid | 50.64 | 55.83 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 50.32 | 55.48 |
| TraesCS2D01G531000.1 | Wheat | plastid | 48.72 | 54.48 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 51.28 | 51.28 |
| Solyc12g036510.1.1 | Tomato | cytosol | 36.54 | 48.31 |
| HORVU2Hr1G116450.1 | Barley | plastid | 48.72 | 47.95 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 41.67 | 45.94 |
| KRH76339 | Soybean | cytosol | 16.03 | 44.25 |
| CDX91138 | Canola | cytosol, plastid | 18.59 | 36.02 |
| CDY02527 | Canola | cytosol | 22.76 | 27.0 |
| CDY65036 | Canola | cytosol | 22.76 | 27.0 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 12.82 | 16.39 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078HSD5 | UniProt:A0A078HSD5 | EnsemblPlants:CDY40209 | ProteinID:CDY40209 |
| ProteinID:CDY40209.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00069356001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI0004EF0435 | : | : | : | : | : |
Description
BnaA09g34910DBnaA09g34910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HSD5]
Coordinates
chrLK032466:+:71519..72852
Molecular Weight (calculated)
34092.3 Da
IEP (calculated)
8.473
GRAVY (calculated)
-0.070
Length
312 amino acids
Sequence
(BLAST)
(BLAST)
001: MYNGNTLNLN CLDEAAGDFG ERDSFTVRNT MSSNHQTVMK QLEPWCELKD KVVLLTGASS GIGREICLDL AKSGCKIIAA ARRLDRLQSL CSEINAFSTK
101: TKLAAPLELD VSSDTSTIRN AVKQAWDIFG HIDVLINNAG IRGNVKSSLD LSEEEWERVF RTNLTGPWLV SKHVCVLMRD AKRGGGSVIN VSSIAGLQRG
201: KLPGALAYAC SKGGLDIMTK MMAVEMGEYG IRVNSIAPGL FKSEITEGLM RKEWMKNVRE RIVPLKVQQS VDPGLTSLVR YLIHDSSRYV SGNVYIVDAG
301: STLSGLPIFS SL
101: TKLAAPLELD VSSDTSTIRN AVKQAWDIFG HIDVLINNAG IRGNVKSSLD LSEEEWERVF RTNLTGPWLV SKHVCVLMRD AKRGGGSVIN VSSIAGLQRG
201: KLPGALAYAC SKGGLDIMTK MMAVEMGEYG IRVNSIAPGL FKSEITEGLM RKEWMKNVRE RIVPLKVQQS VDPGLTSLVR YLIHDSSRYV SGNVYIVDAG
301: STLSGLPIFS SL
001: MSNHQTKQVL KQLEPWCELK DKVVLVTGAS SGIGREICLD LCKAGCKIVA AARRVDRLNS LCSEINSFGA IGVQAAALEL DVSSDADTIR KAVKEAWEIF
101: GTIDVLINNA GIRGNVKSSL DLSKEEWDKV FRTNLTGSWL ISKYVCLLMR DAKRGGSVIN VSSISGLHRG LLRGGLAYAC SKGGVDTMTR MMAIELAVYK
201: IRVNSIAPGI FRSEITQGLF QKEWLEKVTE KIVPLKMQQT VDPGLTSLVR YLIHDSSQYV TGNTYIVDSG ATLPGVPIFS SL
101: GTIDVLINNA GIRGNVKSSL DLSKEEWDKV FRTNLTGSWL ISKYVCLLMR DAKRGGSVIN VSSISGLHRG LLRGGLAYAC SKGGVDTMTR MMAIELAVYK
201: IRVNSIAPGI FRSEITQGLF QKEWLEKVTE KIVPLKMQQT VDPGLTSLVR YLIHDSSQYV TGNTYIVDSG ATLPGVPIFS SL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.