CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH44614
KRH47290

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55290.1	KRH44614	AT1G51580.1	21798944
AT3G55290.1	KRH47290	AT1G51580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH71621	Soybean	cytosol	74.82	74.82
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	63.12	65.93
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	53.55	65.65
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	20.92	64.84
VIT_08s0040g01200.t01	Wine grape	cytosol	65.6	64.69
PGSC0003DMT400088158	Potato	cytosol	58.87	64.59
Os08t0510400-01	Rice	plastid	64.89	64.44
VIT_08s0040g01190.t01	Wine grape	cytosol	65.25	64.34
CDY07809	Canola	plastid	33.69	64.19
CDY29207	Canola	plastid	33.69	64.19
Bra024488.1-P	Field mustard	plastid	33.69	64.19
PGSC0003DMT400072205	Potato	cytosol	65.96	64.14
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	61.35	64.07
Zm00001d031453_P001	Maize	cytosol	63.48	63.93
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	60.99	63.47
EES14264	Sorghum	cytosol, plastid	62.41	63.08
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	30.14	62.96
TraesCS7B01G144400.1	Wheat	cytosol	63.12	62.9
TraesCS7D01G245700.1	Wheat	cytosol	63.12	62.9
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	60.64	62.87
TraesCS7A01G246900.1	Wheat	plastid	62.77	62.54
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	61.7	62.37
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	59.93	62.36
AT3G55290.1	Thale cress	cytosol	61.35	61.79
AT1G62610.4	Thale cress	cytosol, nucleus, peroxisome	61.7	61.7
TraesCS2D01G531000.1	Wheat	plastid	60.99	61.65
TraesCS7A01G427800.1	Wheat	mitochondrion	60.64	61.29
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	58.87	61.25
Bra014762.1-P	Field mustard	cytosol	60.64	61.07
AT3G55310.1	Thale cress	cytosol	60.28	60.93
AT1G63380.2	Thale cress	cytosol	61.7	60.63
CDY29203	Canola	cytosol	59.22	60.07
Bra040871.1-P	Field mustard	cytosol	59.22	60.07
CDX73333	Canola	cytosol, nucleus, peroxisome	59.57	60.0
CDY03343	Canola	cytosol, nucleus, peroxisome	59.57	60.0
AT3G46170.1	Thale cress	cytosol, extracellular, peroxisome	60.99	59.72
Bra014761.1-P	Field mustard	cytosol	53.55	59.45
Bra002097.1-P	Field mustard	cytosol	58.51	59.35
Bra014757.1-P	Field mustard	cytosol	58.87	59.29
CDX76107	Canola	cytosol, nucleus, peroxisome	58.87	59.29
CDY48725	Canola	cytosol, peroxisome, plastid	60.28	59.23
CDY07814	Canola	cytosol	58.16	58.99
CDY44938	Canola	cytosol, peroxisome, plastid	59.22	58.8
Bra036706.1-P	Field mustard	cytosol	59.57	58.54
CDY65313	Canola	cytosol, nucleus, peroxisome	57.45	57.45
Bra014760.1-P	Field mustard	plastid	46.81	57.39
Solyc12g100280.1.1	Tomato	cytosol	26.24	57.36
HORVU7Hr1G050760.2	Barley	vacuole	63.12	57.05
PGSC0003DMT400062814	Potato	cytosol	19.86	56.0
KRH76339	Soybean	cytosol	22.34	55.75
CDY02920	Canola	cytosol	45.39	54.01
CDY40209	Canola	peroxisome	59.57	53.85
HORVU2Hr1G116450.1	Barley	plastid	59.93	53.31
AT2G17845.1	Thale cress	golgi, peroxisome, plastid	58.87	53.21
GSMUA_Achr3P03770_001	Banana	cytosol	10.64	52.63
VIT_08s0040g01210.t01	Wine grape	cytosol	48.94	48.76
Bra007151.1-P	Field mustard	cytosol	58.87	37.05
CDX73391	Canola	cytosol	60.28	36.25
KRH03600	Soybean	cytosol	27.66	29.1
CDX91138	Canola	cytosol, plastid	15.96	27.95

Protein Annotations

EntrezGene:100819950	Gene3D:3.40.50.720	MapMan:35.1	UniProt:A0A0R0L6W1	EMBL:ACUP02000915	EnsemblPlantsGene:GLYMA_02G157200
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
EnsemblPlants:KRH71588	ProteinID:KRH71588	ProteinID:KRH71588.1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI00018908B8	:	:	:	:

Description

hypothetical protein

Coordinates

chr2:+:16957210..16963062

Molecular Weight (calculated)

30688.2 Da

IEP (calculated)

8.481

GRAVY (calculated)

0.023

Length

282 amino acids

Sequence
(BLAST)

001: MNAIAAEQVL EPWHKLDDKV VLVTGASSGL GRDFCIDLAK AGCCVVAAAR RLDRLTSLCH EINHRWPSNV GIHRAVAVEL DVAADGPAID RAVQKAWDAF
101: GRVDSLINNA GVRGSVKSPL KLSEEEWDHV FKTNLTGCWL VSKYVCKRMC DIQLKGSIIN ISSVSGLNRG QLPGAAAYAS SKAGVNMLTK VMAMELGMHK
201: IRVNSISPGI FKSEITENLL QKDWLNDVVR KIMPLRRLGT SDPALTSLAR YLIHDSSEYV TGNNFIVDYG GTLPGVPIYS SL

Best Arabidopsis Sequence Match ( AT3G55290.2 )
(BLAST)

001: MSNHQTVLKL LEPWCELKDK VVLVTGASSG IGREICLDLA KAGCQVIAAA RRVDRLNSLC SEINSFSSTG IQAAALELDV SSDAATIQKA VREAWDIFGK
101: IDALINNAGI RGNVKSSLDL SEDEWDNVFK TNLKGPWLVS KHVCMLMRDA KRGGSVINIS SIAGIRGMLP GGLAYACSKG GVDTMSRMMA LELGVHKIRV
201: NSIAPGLFKS EITQGLMQKE WLKNVTERTV PLKVQQTVDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.