Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g006860.2.1 | Tomato | plastid | 72.87 | 34.06 |
| Solyc12g100220.1.1 | Tomato | plastid | 67.44 | 32.1 |
| Solyc12g044940.1.1 | Tomato | nucleus | 64.34 | 30.63 |
| Solyc12g036510.1.1 | Tomato | cytosol | 55.81 | 30.51 |
| Solyc12g045030.1.1 | Tomato | nucleus | 63.57 | 30.26 |
| Solyc10g080890.1.1 | Tomato | cytosol | 62.79 | 27.93 |
| Solyc10g080900.1.1 | Tomato | plastid | 59.69 | 26.83 |
| Os08t0510400-01 | Rice | plastid | 58.91 | 26.76 |
| KRH71588 | Soybean | cytosol | 57.36 | 26.24 |
| KRH71621 | Soybean | cytosol | 57.36 | 26.24 |
| EES14264 | Sorghum | cytosol, plastid | 56.59 | 26.16 |
| TraesCS7A01G246900.1 | Wheat | plastid | 57.36 | 26.15 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 57.36 | 26.15 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 55.04 | 25.45 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 54.26 | 25.09 |
| Solyc10g078360.1.1 | Tomato | cytosol | 56.59 | 25.09 |
| Zm00001d031453_P001 | Maize | cytosol | 54.26 | 25.0 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 54.26 | 24.73 |
| TraesCS2D01G531000.1 | Wheat | plastid | 52.71 | 24.37 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 56.59 | 23.4 |
| HORVU2Hr1G116450.1 | Barley | plastid | 52.71 | 21.45 |
| Solyc07g047800.2.1 | Tomato | cytosol, nucleus, plastid | 27.91 | 13.53 |
| KRH76339 | Soybean | cytosol | 0.78 | 0.88 |
Protein Annotations
| EnsemblPlants:Solyc12g100280.1.1 | EnsemblPlantsGene:Solyc12g100280.1 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR44375 |
| PANTHER:PTHR44375:SF1 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 |
| UniParc:UPI000276946E | UniProt:K4DI49 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr12:-:67048802..67049510
Molecular Weight (calculated)
14077.1 Da
IEP (calculated)
8.762
GRAVY (calculated)
0.019
Length
129 amino acids
Sequence
(BLAST)
(BLAST)
001: MNSEGIRRAF ALKLDVMSNG ATMEAAVERA WDAFGHINVL INNAGIRGPV SSPLELSEEE WEHTFNTNLR GAWLLSKYVC RRMRDAKLQG GGSVINISSV
101: SGLNRVLVPG GLAYACSKMA LDMLTRIPL
101: SGLNRVLVPG GLAYACSKMA LDMLTRIPL
001: MSFWFRDKSL YVMGISFSTK EHTKRNNMSN HQTVREILLL LYLTCELKDK VVLVTGASSG IGREVCLDLA KAGCKIIAAA RRVDRLKSLC SEINRFEYSA
101: GIQAEALELD VSSDAATVQK AVKKAWEIFG KIDALINNAG FRGNVKSSLD LSEDEWDKVF KTNLTGTWLV SKYVCILMRD AKRGGGSVIN ISSVSWLHRG
201: QVPGGVAYAC SKGGVDTMTR MMALELGVYK IRVNSIAPGL LKSEITQGLM QKEWLKTVIE RTVPLKVQQT VDPGLTSLLR YLVHDSSKYI SGNTYIVDAG
301: ASLVGLPIFS SL
101: GIQAEALELD VSSDAATVQK AVKKAWEIFG KIDALINNAG FRGNVKSSLD LSEDEWDKVF KTNLTGTWLV SKYVCILMRD AKRGGGSVIN ISSVSWLHRG
201: QVPGGVAYAC SKGGVDTMTR MMALELGVYK IRVNSIAPGL LKSEITQGLM QKEWLKTVIE RTVPLKVQQT VDPGLTSLLR YLVHDSSKYI SGNTYIVDAG
301: ASLVGLPIFS SL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IPI3]
SUBAcon: [peroxisome,golgi,plastid]
SUBAcon: [peroxisome,golgi,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.