Factsheet for Solyc10g078360.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
plastid 1
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014256	Potato	cytosol, nucleus, plastid	36.77	96.4
PGSC0003DMT400018472	Potato	cytosol	91.41	96.38
PGSC0003DMT400021571	Potato	cytosol	55.33	92.53
PGSC0003DMT400021572	Potato	cytosol, mitochondrion	38.14	89.52
VIT_08s0040g01190.t01	Wine grape	cytosol	67.01	68.18
Solyc12g100220.1.1	Tomato	plastid	61.17	65.68
VIT_08s0040g01200.t01	Wine grape	cytosol	63.92	65.03
Solyc12g045030.1.1	Tomato	nucleus	59.45	63.84
Solyc10g080900.1.1	Tomato	plastid	61.17	62.02
Solyc10g006860.2.1	Tomato	plastid	58.76	61.96
Zm00001d031453_P001	Maize	cytosol	58.76	61.07
Os08t0510400-01	Rice	plastid	59.45	60.92
Solyc12g044940.1.1	Tomato	nucleus	56.7	60.89
EES14264	Sorghum	cytosol, plastid	58.08	60.57
TraesCS7A01G427800.1	Wheat	mitochondrion	57.73	60.22
TraesCS7A01G246900.1	Wheat	plastid	58.08	59.72
TraesCS7D01G245700.1	Wheat	cytosol	58.08	59.72
Solyc10g080890.1.1	Tomato	cytosol	59.45	59.66
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	56.36	58.78
TraesCS2D01G531000.1	Wheat	plastid	56.36	58.78
TraesCS7B01G144400.1	Wheat	cytosol	57.04	58.66
Solyc12g100280.1.1	Tomato	cytosol	25.09	56.59
HORVU7Hr1G050760.2	Barley	vacuole	58.76	54.81
HORVU2Hr1G116450.1	Barley	plastid	56.01	51.42
Solyc12g036510.1.1	Tomato	cytosol	40.21	49.58
Solyc07g047800.2.1	Tomato	cytosol, nucleus, plastid	26.12	28.57

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016491	GO:GO:0055114	UniProt:K4D278	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080
PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2	InterPro:SDR_fam	SUPFAM:SSF51735
InterPro:Sc_DH/Rdtase_CS	EnsemblPlantsGene:Solyc10g078360.1	EnsemblPlants:Solyc10g078360.1.1	UniParc:UPI000276A241	SEG:seg	:

Description

No Description!

Coordinates

chr10:-:60184789..60186363

Molecular Weight (calculated)

31599.0 Da

IEP (calculated)

9.366

GRAVY (calculated)

-0.056

Length

291 amino acids

Sequence
(BLAST)

001: MTTYVEPRTQ KMNNVANHLE PWLQLEGKVV FVTGASAGLG REFCLDLARS GCRVVAGARR ADRLKSLCDE INTMSSSNSH LVRAMAIELD VTADGTTIEA
101: SVKKAWDAFG HIDALINNAG VRGGIKSSVD ISWEEWENTL RTNLTGSWLV SKYVGRQMQA SKKGGSIINI SSISGLNRAL MRGGIAYSSS KAAMDSMTKI
201: MALELGEHNI RVNAIAPGLF KSEITENLVK KDWIQNVAKR SIPLKTFGTT DPALTSLLRY LVHDSSNYVS GNIFIVDAGY TLPGVPIFSS L

Best Arabidopsis Sequence Match ( AT1G62610.1 )
(BLAST)

001: MQQVLKQLEP WCELKDKVVL VTGASSGIGR EICLDLCKAG CKIVAAARRV DRLNSLCSEI NSFGAIGVQA AALELDVSSD ADTIRKAVKE AWEIFGTIDV
101: LINNAGIRGN VKSSLDLSKE EWDKVFRTNL TGSWLISKYV CLLMRDAKRG GSVINVSSIS GLHRGLLRGG LAYACSKGGV DTMTRMMAIE LAVYKIRVNS
201: IAPGIFRSEI TQGLFQKEWL EKVTEKIVPL KMQQTVDPGL TSLVRYLIHD SSQYVTGNTY IVDSGATLPG VPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.