Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400014256 | Potato | cytosol, nucleus, plastid | 38.41 | 95.5 |
| Solyc10g078360.1.1 | Tomato | cytosol | 96.38 | 91.41 |
| PGSC0003DMT400021571 | Potato | cytosol | 55.07 | 87.36 |
| PGSC0003DMT400021572 | Potato | cytosol, mitochondrion | 36.96 | 82.26 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 69.57 | 67.13 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 67.03 | 64.69 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 63.41 | 64.34 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 62.32 | 63.47 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 52.54 | 63.04 |
| PGSC0003DMT400088158 | Potato | cytosol | 58.7 | 63.03 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 61.59 | 62.96 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 30.8 | 62.96 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 61.23 | 62.59 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 61.23 | 62.36 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 60.14 | 61.25 |
| Zm00001d031453_P001 | Maize | cytosol | 61.59 | 60.71 |
| PGSC0003DMT400072205 | Potato | cytosol | 63.77 | 60.69 |
| Os08t0510400-01 | Rice | plastid | 62.32 | 60.56 |
| EES14264 | Sorghum | cytosol, plastid | 60.87 | 60.22 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 61.23 | 59.72 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 60.14 | 59.5 |
| TraesCS7A01G246900.1 | Wheat | plastid | 60.87 | 59.36 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 19.57 | 59.34 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 59.78 | 58.3 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 58.7 | 58.06 |
| TraesCS2D01G531000.1 | Wheat | plastid | 58.33 | 57.71 |
| PGSC0003DMT400062814 | Potato | cytosol | 20.65 | 57.0 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 60.87 | 53.85 |
| HORVU2Hr1G116450.1 | Barley | plastid | 57.97 | 50.47 |
| PGSC0003DMT400015737 | Potato | cytosol | 28.62 | 29.7 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 |
| GO:GO:0016491 | GO:GO:0055114 | UniProt:M1AAP4 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | EnsemblPlantsGene:PGSC0003DMG400007169 |
| PGSC:PGSC0003DMG400007169 | EnsemblPlants:PGSC0003DMT400018472 | PRINTS:PR00080 | PRINTS:PR00081 | ScanProsite:PS00061 | PANTHER:PTHR44375 |
| PANTHER:PTHR44375:SF2 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS | UniParc:UPI000294E4A2 | SEG:seg |
Description
2,4-dienoyl-CoA reductase [Source:PGSC_GENE;Acc:PGSC0003DMG400007169]
Coordinates
chr10:+:59385882..59389817
Molecular Weight (calculated)
29893.0 Da
IEP (calculated)
8.618
GRAVY (calculated)
0.016
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MNNVANHLEP WLQLEGKVVF VTGASAGLGR EFCLDLARSG CRVVAGARRG DRLKSLCDEI NTNSHLVRAM AIELDVTADG TTIEASVKKA WDAFGHIDAL
101: INNAGVRGGI KSSVDISEEE WENTLRTNLT GSWLVSKYVG RQMQASKKGG SIINISSISG LNRALMRGAI AYSSSKAAMD SMTFIMALEL GEHNIRVNAI
201: APGLFKSEIT ENLVKKEWLK NVAKRSIPLK TFGTTDPALT SLLRYLVHDS SNYVCGNIFI VDASYTLPGV PIFSSL
101: INNAGVRGGI KSSVDISEEE WENTLRTNLT GSWLVSKYVG RQMQASKKGG SIINISSISG LNRALMRGAI AYSSSKAAMD SMTFIMALEL GEHNIRVNAI
201: APGLFKSEIT ENLVKKEWLK NVAKRSIPLK TFGTTDPALT SLLRYLVHDS SNYVCGNIFI VDASYTLPGV PIFSSL
001: MQQVLKQLEP WCELKDKVVL VTGASSGIGR EICLDLCKAG CKIVAAARRV DRLNSLCSEI NSFGAIGVQA AALELDVSSD ADTIRKAVKE AWEIFGTIDV
101: LINNAGIRGN VKSSLDLSKE EWDKVFRTNL TGSWLISKYV CLLMRDAKRG GSVINVSSIS GLHRGLLRGG LAYACSKGGV DTMTRMMAIE LAVYKIRVNS
201: IAPGIFRSEI TQGLFQKEWL EKVTEKIVPL KMQQTVDPGL TSLVRYLIHD SSQYVTGNTY IVDSGATLPG VPIFSSL
101: LINNAGIRGN VKSSLDLSKE EWDKVFRTNL TGSWLISKYV CLLMRDAKRG GSVINVSSIS GLHRGLLRGG LAYACSKGGV DTMTRMMAIE LAVYKIRVNS
201: IAPGIFRSEI TQGLFQKEWL EKVTEKIVPL KMQQTVDPGL TSLVRYLIHD SSQYVTGNTY IVDSGATLPG VPIFSSL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.