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Wheat
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Wheat
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • plastid 3
  • peroxisome 1
  • mitochondrion 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:plastid
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
iPSORT:plastid
MultiLoc:peroxisome
Predotar:plastid
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI

Inferred distinct locusB in Crop

locusBlocations
TraesCS5A01G276800.5
TraesCS5B01G276400.1
TraesCS5D01G284200.4

Inferred from Arabidopsis experimental PPI

Ath locusAlocusBAth locusBPaper
AT3G55290.1 TraesCS5A01G276800.5 AT1G51580.1 21798944
AT3G55290.1 TraesCS5B01G276400.1 AT1G51580.1 21798944
AT3G55290.1 TraesCS5D01G284200.4 AT1G51580.1 21798944
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS7D01G245700.1 Wheat cytosol 98.59 98.59
TraesCS7B01G144400.1 Wheat cytosol 96.82 96.82
HORVU7Hr1G050760.2 Barley vacuole 96.47 87.5
TraesCS7A01G427800.1 Wheat mitochondrion 81.98 83.15
Zm00001d031453_P001 Maize cytosol 81.98 82.86
EES14264 Sorghum cytosol, plastid 81.63 82.8
Os08t0510400-01 Rice plastid 80.92 80.63
TraesCS2A01G528100.1 Wheat cytosol, peroxisome, plastid 79.15 80.29
GSMUA_Achr3P03760_001 Banana cytosol 66.08 66.08
GSMUA_Achr3P28470_001 Banana cytosol, mitochondrion 65.37 65.14
GSMUA_Achr9P12400_001 Banana cytosol 64.66 63.76
GSMUA_Achr11P... Banana mitochondrion 62.54 63.44
PGSC0003DMT400014256 Potato cytosol, nucleus, plastid 24.73 63.06
KRH71588 Soybean cytosol 62.54 62.77
Solyc12g100220.1.1 Tomato plastid 60.07 62.73
PGSC0003DMT400088158 Potato cytosol 56.54 62.26
PGSC0003DMT400092434 Potato cytosol, nucleus, peroxisome 59.36 62.22
PGSC0003DMT400061270 Potato cytosol, nucleus, peroxisome 59.36 61.76
VIT_08s0040g01200.t01 Wine grape cytosol 62.19 61.54
PGSC0003DMT400072205 Potato cytosol 62.9 61.38
PGSC0003DMT400030315 Potato nucleus, peroxisome, plastid 58.66 61.25
VIT_08s0040g01190.t01 Wine grape cytosol 61.84 61.19
PGSC0003DMT400030316 Potato nucleus, peroxisome, plastid 58.3 61.11
PGSC0003DMT400018472 Potato cytosol 59.36 60.87
PGSC0003DMT400064364 Potato peroxisome, plastid, vacuole 28.98 60.74
PGSC0003DMT400096536 Potato cytosol, nucleus, peroxisome 49.12 60.43
KRH71621 Soybean cytosol 60.07 60.28
Solyc10g080900.1.1 Tomato plastid 61.13 60.28
GSMUA_Achr3P11750_001 Banana cytosol 56.89 60.07
Solyc10g080890.1.1 Tomato cytosol 61.48 60.0
Solyc10g006860.2.1 Tomato plastid 58.3 59.78
PGSC0003DMT400036569 Potato nucleus, peroxisome, plastid 57.24 59.78
AT3G55290.1 Thale cress cytosol 59.01 59.64
CDY07809 Canola plastid 31.1 59.46
CDY29207 Canola plastid 30.74 58.78
Bra024488.1-P Field mustard plastid 30.74 58.78
PGSC0003DMT400083885 Potato nucleus, peroxisome, plastid 56.18 58.67
Solyc12g045030.1.1 Tomato nucleus 56.18 58.67
AT1G62610.4 Thale cress cytosol, nucleus, peroxisome 58.3 58.51
AT3G55310.1 Thale cress cytosol 57.6 58.42
Bra002097.1-P Field mustard cytosol 57.24 58.27
Solyc10g078360.1.1 Tomato cytosol 59.72 58.08
CDY29203 Canola cytosol 56.89 57.91
Bra040871.1-P Field mustard cytosol 56.89 57.91
Solyc12g044940.1.1 Tomato nucleus 55.12 57.56
AT1G63380.2 Thale cress cytosol 58.3 57.49
Solyc12g100280.1.1 Tomato cytosol 26.15 57.36
CDY07814 Canola cytosol 56.18 57.19
PGSC0003DMT400036566 Potato cytosol, extracellular, nucleus 18.37 57.14
CDY03343 Canola cytosol, nucleus, peroxisome 56.54 57.14
Bra014762.1-P Field mustard cytosol 56.54 57.14
PGSC0003DMT400062814 Potato cytosol 20.14 57.0
PGSC0003DMT400021572 Potato cytosol, mitochondrion 24.73 56.45
CDX73333 Canola cytosol, nucleus, peroxisome 55.83 56.43
Bra036706.1-P Field mustard cytosol 56.89 56.1
CDX76107 Canola cytosol, nucleus, peroxisome 55.48 56.07
CDY48725 Canola cytosol, peroxisome, plastid 56.54 55.75
Bra014757.1-P Field mustard cytosol 55.12 55.71
CDY44938 Canola cytosol, peroxisome, plastid 55.83 55.63
AT3G46170.1 Thale cress cytosol, extracellular, peroxisome 56.54 55.56
CDY65313 Canola cytosol, nucleus, peroxisome 54.77 54.96
Bra014761.1-P Field mustard cytosol 48.41 53.94
Bra014760.1-P Field mustard plastid 43.82 53.91
PGSC0003DMT400021571 Potato cytosol 32.51 52.87
AT2G17845.1 Thale cress golgi, peroxisome, plastid 56.54 51.28
CDY40209 Canola peroxisome 55.83 50.64
CDY02920 Canola cytosol 42.05 50.21
Solyc12g036510.1.1 Tomato cytosol 39.22 47.03
VIT_08s0040g01210.t01 Wine grape cytosol 46.29 46.29
KRH76339 Soybean cytosol 16.25 40.71
Bra007151.1-P Field mustard cytosol 55.48 35.04
CDX73391 Canola cytosol 56.18 33.9
TraesCS4A01G339500.1 Wheat cytosol 27.56 28.47
CDX91138 Canola cytosol, plastid 15.55 27.33
Protein Annotations
EnsemblPlants:TraesCS7A01G246900.1EnsemblPlantsGene:TraesCS7A01G246900Gene3D:3.40.50.720GO:GO:0003674GO:GO:0003824GO:GO:0008150
GO:GO:0008152GO:GO:0016491InterPro:NAD(P)-bd_dom_sfInterPro:SDR_famInterPro:Sc_DH/Rdtase_CSPANTHER:PTHR44375
PANTHER:PTHR44375:SF2PFAM:PF00106PRINTS:PR00080PRINTS:PR00081ScanProsite:PS00061SEG:seg
SMART:SM00822SUPFAM:SSF51735TIGR:cd05233MapMan:35.1::
Description
No Description!
Coordinates
chr7A:-:226757771..226758981
Molecular Weight (calculated)
29924.2 Da
IEP (calculated)
9.827
GRAVY (calculated)
0.185
Length
283 amino acids
Sequence
(BLAST)
001: MASSLPEKAG VPPWSRLEGQ VVLVTGASSG IGRDFCLDLA RAGCRVVAAA RRADRLRSLC DEVNASADAA ASHPRAVAVE LDVAAGGSAV EAAVQRAWDA
101: FGRIDVLINN AGLRGGVHSS LDWPEDEWDK LIKTNLTGLW LVAKHVCRHM RDAKIKGSVI NISSVAGLNR GNLPGSIGYA SSKSAVHSVT KIMALELGGY
201: RIRVNAIAPG IFQSEITAPL LQKRWLSTVV SKIVPLKTNG TTDPALTSLV RFLIHEKASY ITGNIFIVDS GVTVPGVPIF SSL
Best Arabidopsis Sequence Match ( AT1G63380.3 )
(BLAST)
001: MQKQVLKQLE PWCELKDKVV LVTGASSGIG REICLDLCKA GCKIVAAARR VDRLNSLCSE INSFGAIGVQ AVALELDVSS EADTIRKAVK EAWETFGKID
101: VLINNAGIRG NVKSSLDLSE EEWDKVFRTN LTGSWLISKY VCLLMRDAER GGSVINVSSI SGLHRGLLRG GLAYACSKGG VDTMTRMMAI ELAVYKIRVN
201: SIAPGIFRSE ITQGLFQKEW LKKVTEKVVP LKMQQTVDPG LTSLVRYLIH DSSQYVTGNT YIVDSGTTLP GVPIFSSLSP
Arabidopsis Description
F2K11.24 [Source:UniProtKB/TrEMBL;Acc:Q9SH24]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.