Factsheet for TraesCS4A01G339500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

mitochondrion 2
cytosol 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5B01G549100.1	Wheat	cytosol, peroxisome, plastid	95.26	95.26
TraesCS5D01G536000.3	Wheat	endoplasmic reticulum, peroxisome, plastid	97.08	89.56
EER90514	Sorghum	cytosol	75.91	77.9
Zm00001d012849_P001	Maize	cytosol	75.55	76.95
Os03t0850000-01	Rice	cytosol	75.55	74.73
HORVU7Hr1G092130.2	Barley	cytosol, nucleus, plastid	62.41	64.04
GSMUA_Achr8P17880_001	Banana	cytosol	24.45	63.81
HORVU3Hr1G097170.1	Barley	plastid	62.41	63.33
GSMUA_Achr4P16020_001	Banana	cytosol	58.03	59.77
Solyc07g047800.2.1	Tomato	cytosol, nucleus, plastid	52.19	53.76
VIT_14s0068g01760.t01	Wine grape	cytosol	51.82	53.38
PGSC0003DMT400015737	Potato	cytosol	51.82	53.38
Bra030964.1-P	Field mustard	cytosol	50.0	52.09
CDY65036	Canola	cytosol	49.63	51.71
CDY02527	Canola	cytosol	49.27	51.33
KRH03600	Soybean	cytosol	49.27	50.37
GSMUA_Achr8P17860_001	Banana	cytosol	31.75	48.88
AT3G01980.3	Thale cress	cytosol	46.72	43.24
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	29.93	29.39
TraesCS7A01G246900.1	Wheat	plastid	28.47	27.56
TraesCS7A01G427800.1	Wheat	mitochondrion	27.74	27.24

Protein Annotations

EnsemblPlants:TraesCS4A01G339500.1	EnsemblPlantsGene:TraesCS4A01G339500	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2
PFAM:PF13561	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	TIGR:cd05233	MapMan:35.2

Description

No Description!

Coordinates

chr4A:+:621168849..621170039

Molecular Weight (calculated)

28880.9 Da

IEP (calculated)

6.865

GRAVY (calculated)

0.169

Length

274 amino acids

Sequence
(BLAST)

001: MAADAAYVKR VLLACNGGGD AVSRGVAVGL ARHGCRLVLV GDEGALAATA EEARRCAAGG AAAVAVVGLD FAACDEAAVG AAVEAAWRCF GDGGLDALVN
101: CCSYEGEVQD CLSVTEDEYN KTMKVNVITP WLLIKAIAKR FRDAQSGGSV VCLTQIIGAE RGLYPGAAAY GTSLGAVHQL VRLSAMELGK HKIRVNAVCR
201: GLHLGDKFPV SVGEEKAEKA TREVMPLRRW LDPEKDLAST VLYLVGDDSR FMTGTTIYVD GAQSIVRPRM RSFL

Best Arabidopsis Sequence Match ( AT3G01980.4 )
(BLAST)

001: MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL GKHKIRVNMI SRGLHLDDEY
201: TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG SRFMTGTTVL VDGAQSLTRP RLKSYM

Arabidopsis Description

F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.