CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 2
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d012849_P001	Maize	cytosol	94.38	93.68
Os03t0850000-01	Rice	cytosol	82.77	79.78
TraesCS4A01G339500.1	Wheat	cytosol	77.9	75.91
TraesCS5B01G549100.1	Wheat	cytosol, peroxisome, plastid	77.15	75.18
TraesCS5D01G536000.3	Wheat	endoplasmic reticulum, peroxisome, plastid	77.53	69.7
GSMUA_Achr8P17880_001	Banana	cytosol	26.22	66.67
GSMUA_Achr4P16020_001	Banana	cytosol	62.55	62.78
VIT_14s0068g01760.t01	Wine grape	cytosol	57.3	57.52
Solyc07g047800.2.1	Tomato	cytosol, nucleus, plastid	57.3	57.52
PGSC0003DMT400015737	Potato	cytosol	56.93	57.14
Bra030964.1-P	Field mustard	cytosol	55.81	56.65
CDY65036	Canola	cytosol	55.43	56.27
HORVU7Hr1G092130.2	Barley	cytosol, nucleus, plastid	56.18	56.18
HORVU3Hr1G097170.1	Barley	plastid	56.55	55.93
KRH03600	Soybean	cytosol	55.81	55.6
CDY02527	Canola	cytosol	54.68	55.51
GSMUA_Achr8P17860_001	Banana	cytosol	35.96	53.93
AT3G01980.3	Thale cress	cytosol	52.06	46.96
EES14264	Sorghum	cytosol, plastid	30.34	29.03

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	EntrezGene:8061411	UniProt:C5WSW3	EnsemblPlants:EER90514	ProteinID:EER90514
ProteinID:EER90514.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777
InterPro:NAD(P)-bd_dom_sf	PFAM:PF13561	PRINTS:PR00081	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2	InterPro:SDR_fam
EnsemblPlantsGene:SORBI_3001G012100	SUPFAM:SSF51735	unigene:Sbi.7757	UniParc:UPI0001A824E1	RefSeq:XP_002463516.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:+:1042020..1047090

Molecular Weight (calculated)

28700.7 Da

IEP (calculated)

7.747

GRAVY (calculated)

0.040

Length

267 amino acids

Sequence
(BLAST)

001: MGDAYAKRVL LTAAGDAVSR GIASTLAKHG CRLVLLGDEG ALAATAEEAR RCGDGGGGVE LVGLDLEACG EAAADAAVDR AWRCFAGLDA FVNCYSYEGE
101: VQDCLSISED EYRKTIKVNV VTPWFLMKAI AKRFQDTKSG GSIVFLTQII GAERGLYPGA AAYGTSLGAI HQLVRLSAME LGKHKIRVNA ACRGLHLQDK
201: FPVSVGKEKA EKATAVVMPL RRWLDPEKDL ASMVLYLVGD ESRYMTGTTI FVDGAQSIVR PRMRSFM

Best Arabidopsis Sequence Match ( AT3G01980.4 )
(BLAST)

001: MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL GKHKIRVNMI SRGLHLDDEY
201: TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG SRFMTGTTVL VDGAQSLTRP RLKSYM

Arabidopsis Description

F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.