Factsheet for TraesCS5D01G536000.3

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, plastid, peroxisome

Predictor Summary:

mitochondrion 1
endoplasmic reticulum 2
extracellular 1
vacuole 1
plasma membrane 1
golgi 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, peroxisome, plastid
Any Predictor:	endoplasmic reticulum, peroxisome, plastid
iPSORT:	mitochondrion
MultiLoc:	endoplasmic reticulum
PProwler:	secretory
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G339500.1	Wheat	cytosol	89.56	97.08
TraesCS5B01G549100.1	Wheat	cytosol, peroxisome, plastid	86.87	94.16
EER90514	Sorghum	cytosol	69.7	77.53
Zm00001d012849_P001	Maize	cytosol	69.36	76.58
Os03t0850000-01	Rice	cytosol	70.03	75.09
HORVU7Hr1G092130.2	Barley	cytosol, nucleus, plastid	57.58	64.04
HORVU3Hr1G097170.1	Barley	plastid	57.58	63.33
GSMUA_Achr8P17880_001	Banana	cytosol	21.89	61.9
GSMUA_Achr4P16020_001	Banana	cytosol	52.53	58.65
VIT_14s0068g01760.t01	Wine grape	cytosol	47.14	52.63
Solyc07g047800.2.1	Tomato	cytosol, nucleus, plastid	46.8	52.26
PGSC0003DMT400015737	Potato	cytosol	46.46	51.88
Bra030964.1-P	Field mustard	cytosol	45.45	51.33
CDY65036	Canola	cytosol	45.12	50.95
CDY02527	Canola	cytosol	44.78	50.57
KRH03600	Soybean	cytosol	45.45	50.37
GSMUA_Achr8P17860_001	Banana	cytosol	29.29	48.88
AT3G01980.3	Thale cress	cytosol	42.42	42.57
TraesCS2D01G531000.1	Wheat	plastid	26.6	28.32
TraesCS7D01G245700.1	Wheat	cytosol	25.93	27.21

Protein Annotations

EnsemblPlants:TraesCS5D01G536000.3	EnsemblPlantsGene:TraesCS5D01G536000	Gene3D:3.40.50.720	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	InterPro:NAD(P)-bd_dom_sf	InterPro:SDR_fam	PANTHER:PTHR44375	PANTHER:PTHR44375:SF2
PFAM:PF13561	PRINTS:PR00081	SEG:seg	SUPFAM:SSF51735	TIGR:cd05233	MapMan:35.2

Description

No Description!

Coordinates

chr5D:+:549629702..549630893

Molecular Weight (calculated)

31634.2 Da

IEP (calculated)

7.315

GRAVY (calculated)

0.179

Length

297 amino acids

Sequence
(BLAST)

001: MAADTAYAKR VLLACNGGGD AVSRGVAVGL ARHGCRYSLS LFPFFFFLLF GSESTRAYRL VLVGDEGALA ATAEEARRCA AGGAAAVAVV GLDFAACDEA
101: AVGAAVEAAW RCFGHGGLDA LVNCCSYEGE VQDCLSVTED EYNKTMKVNV ITPWLLIKAM AKRFRDAQSG GSVVCLTQII GAERGLYPGA AAYGTSLGAV
201: HQLVRLSAME LGKHKVRVNA VCRGLHLGDK FPVSMGEEKA EKATGEVMPL RRWLDPEKDL ASTVLYLVGD ESRFMTGTTI YVDGAQSIVR PRMRSFL

Best Arabidopsis Sequence Match ( AT3G01980.5 )
(BLAST)

001: MQCTVARLVM MGNEGSLRSI VDKIRDSIEG AFPADVIALD MESDSEVAFH AAVQKAWELS GHFDAFLNSY TYQGKVQDIL QVSQDEFHRI TKINLTAPWF
101: LLKAVATRMK DHGSGGSIVF MATIASGERA LYPGADAYAS TSAAIHQLVR ASAMSLGKHK IRVNMISRGL HLDDEYTASV GRDRAQKLVK DAAPLGQWLN
201: PDTDLYSTVI YLISDGSRFM TGTTVLVDGA QSLTRPRLKS YM

Arabidopsis Description

F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.