Factsheet for Os03t0850000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EER90514	Sorghum	cytosol	79.78	82.77
Zm00001d012849_P001	Maize	cytosol	78.7	81.04
TraesCS4A01G339500.1	Wheat	cytosol	74.73	75.55
TraesCS5B01G549100.1	Wheat	cytosol, peroxisome, plastid	74.01	74.82
TraesCS5D01G536000.3	Wheat	endoplasmic reticulum, peroxisome, plastid	75.09	70.03
GSMUA_Achr8P17880_001	Banana	cytosol	24.91	65.71
GSMUA_Achr4P16020_001	Banana	cytosol	59.57	62.03
PGSC0003DMT400015737	Potato	cytosol	55.6	57.89
Solyc07g047800.2.1	Tomato	cytosol, nucleus, plastid	55.23	57.52
HORVU3Hr1G097170.1	Barley	plastid	55.6	57.04
VIT_14s0068g01760.t01	Wine grape	cytosol	54.51	56.77
HORVU7Hr1G092130.2	Barley	cytosol, nucleus, plastid	54.15	56.18
KRH03600	Soybean	cytosol	51.99	53.73
Bra030964.1-P	Field mustard	cytosol	50.9	53.61
CDY65036	Canola	cytosol	50.54	53.23
CDY02527	Canola	cytosol	49.82	52.47
GSMUA_Achr8P17860_001	Banana	cytosol	33.57	52.25
AT3G01980.3	Thale cress	cytosol	47.65	44.59
Os08t0510400-01	Rice	plastid	25.99	25.35

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.2	EntrezGene:4334790	ProteinID:AAO37961.1	ProteinID:ABF99913.1	EMBL:AK105776
ProteinID:BAF13816.1	ProteinID:BAS87370.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	InterPro:NAD(P)-bd_dom_sf	EnsemblPlantsGene:Os03g0850000	EnsemblPlants:Os03t0850000-01	PFAM:PF13561	PRINTS:PR00081
PANTHER:PTHR44375	PANTHER:PTHR44375:SF2	UniProt:Q852E3	InterPro:SDR_fam	SUPFAM:SSF51735	UniParc:UPI0000002755
RefSeq:XP_015631146.1	SEG:seg	:	:	:	:

Description

Glucose/ribitol dehydrogenase family protein. (Os03t0850000-01)

Coordinates

chr3:-:35769802..35772247

Molecular Weight (calculated)

29602.6 Da

IEP (calculated)

5.711

GRAVY (calculated)

-0.020

Length

277 amino acids

Sequence
(BLAST)

001: MLNESMGEGD AAYAKRVLLT AAGDDVSRGI ASTLATHGCR LVLVGDEGAL AGTAEEARRG GGGGDAVAVV GLDLHGCDEA AVDAAVGTAW RCFDGLDAMV
101: NCYSYEGEVQ DCLNISEDEF KKTMKANVMT PWFLVKAIAK RLRDSESSCG GSVVFLTQII GAERGLYPGA AAYGTSLGAI HQLVRLSAME LGKHKMRVNA
201: VCRGLHLGDR FPVWVGKEKA EKATGEVMPL RRWLDPEKDV ASTVLYLVGD ESRYMTGSTI FVDGAQSIVR PRMRSFM

Best Arabidopsis Sequence Match ( AT3G01980.4 )
(BLAST)

001: MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL GKHKIRVNMI SRGLHLDDEY
201: TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG SRFMTGTTVL VDGAQSLTRP RLKSYM

Arabidopsis Description

F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.