Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 1
- mitochondrion 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P16020_001 | Banana | cytosol | 77.53 | 51.88 |
| KRH03600 | Soybean | cytosol | 59.55 | 39.55 |
| VIT_14s0068g01760.t01 | Wine grape | cytosol | 57.87 | 38.72 |
| Solyc07g047800.2.1 | Tomato | cytosol, nucleus, plastid | 57.87 | 38.72 |
| PGSC0003DMT400015737 | Potato | cytosol | 56.74 | 37.97 |
| EER90514 | Sorghum | cytosol | 53.93 | 35.96 |
| Zm00001d012849_P001 | Maize | cytosol | 52.81 | 34.94 |
| Bra030964.1-P | Field mustard | cytosol | 50.56 | 34.22 |
| CDY65036 | Canola | cytosol | 50.0 | 33.84 |
| Os03t0850000-01 | Rice | cytosol | 52.25 | 33.57 |
| CDY02527 | Canola | cytosol | 48.88 | 33.08 |
| TraesCS4A01G339500.1 | Wheat | cytosol | 48.88 | 31.75 |
| TraesCS5B01G549100.1 | Wheat | cytosol, peroxisome, plastid | 47.75 | 31.02 |
| TraesCS5D01G536000.3 | Wheat | endoplasmic reticulum, peroxisome, plastid | 48.88 | 29.29 |
| AT3G01980.3 | Thale cress | cytosol | 48.31 | 29.05 |
| HORVU3Hr1G097170.1 | Barley | plastid | 38.76 | 25.56 |
| HORVU7Hr1G092130.2 | Barley | cytosol, nucleus, plastid | 38.2 | 25.47 |
| GSMUA_Achr11P... | Banana | mitochondrion | 30.9 | 19.71 |
| GSMUA_Achr3P11750_001 | Banana | cytosol | 29.21 | 19.4 |
| GSMUA_Achr9P12400_001 | Banana | cytosol | 30.9 | 19.16 |
| GSMUA_Achr3P28470_001 | Banana | cytosol, mitochondrion | 29.21 | 18.31 |
| GSMUA_Achr3P03760_001 | Banana | cytosol | 28.09 | 17.67 |
| GSMUA_Achr8P17880_001 | Banana | cytosol | 2.25 | 3.81 |
| GSMUA_Achr3P03770_001 | Banana | cytosol | 0.56 | 1.75 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17860_001 | EnsemblPlants:GSMUA_Achr8T17860_001 | EnsemblPlantsGene:GSMUA_Achr8G17860_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR44375 |
| PFAM:PF13561 | SUPFAM:SSF51735 | UniParc:UPI000295D047 | UniProt:M0TRD9 | MapMan:35.2 | : |
Description
Putative Dehydrogenase/reductase SDR family member 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G17860_001]
Coordinates
chr8:+:19133527..19137496
Molecular Weight (calculated)
19492.9 Da
IEP (calculated)
8.308
GRAVY (calculated)
0.068
Length
178 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDSVNRVLL TSAGDEISKG IAYHLAKAGC RLVLMGDKNQ LQKMVGDMAS SFKEVNAFKI VGLNMEEDLE AVFDEAVDLA WKLLGTLDAF VNCCAYEGKM
101: QGCLDVTEHE YKKTIKINFM APWFLLKAVA KRMRDNKTGG SKVFISQILG AERGLYPGAA AYGSSLAGVQ QLVRVRIF
101: QGCLDVTEHE YKKTIKINFM APWFLLKAVA KRMRDNKTGG SKVFISQILG AERGLYPGAA AYGSSLAGVQ QLVRVRIF
001: MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRVCILAP N
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRVCILAP N
Arabidopsis Description
F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.