Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU7Hr1G092130.2 | Barley | cytosol, nucleus, plastid | 82.96 | 83.9 |
| TraesCS4A01G339500.1 | Wheat | cytosol | 63.33 | 62.41 |
| TraesCS5B01G549100.1 | Wheat | cytosol, peroxisome, plastid | 62.96 | 62.04 |
| TraesCS5D01G536000.3 | Wheat | endoplasmic reticulum, peroxisome, plastid | 63.33 | 57.58 |
| EER90514 | Sorghum | cytosol | 55.93 | 56.55 |
| Zm00001d012849_P001 | Maize | cytosol | 56.3 | 56.51 |
| Os03t0850000-01 | Rice | cytosol | 57.04 | 55.6 |
| GSMUA_Achr4P16020_001 | Banana | cytosol | 43.33 | 43.98 |
| GSMUA_Achr8P17880_001 | Banana | cytosol | 16.67 | 42.86 |
| Solyc07g047800.2.1 | Tomato | cytosol, nucleus, plastid | 40.0 | 40.6 |
| PGSC0003DMT400015737 | Potato | cytosol | 39.26 | 39.85 |
| Bra030964.1-P | Field mustard | cytosol | 37.78 | 38.78 |
| GSMUA_Achr8P17860_001 | Banana | cytosol | 25.56 | 38.76 |
| CDY02527 | Canola | cytosol | 37.04 | 38.02 |
| CDY65036 | Canola | cytosol | 36.67 | 37.64 |
| KRH03600 | Soybean | cytosol | 37.04 | 37.31 |
| VIT_14s0068g01760.t01 | Wine grape | cytosol | 36.67 | 37.22 |
| AT3G01980.3 | Thale cress | cytosol | 35.19 | 32.09 |
| HORVU2Hr1G116450.1 | Barley | plastid | 25.93 | 22.08 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 24.81 | 21.47 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G097170.1 | EnsemblPlantsGene:HORVU3Hr1G097170 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | PANTHER:PTHR44375 |
| PANTHER:PTHR44375:SF2 | PFAM:PF13561 | PRINTS:PR00081 | SEG:seg | SUPFAM:SSF51735 | UniParc:UPI000B46E354 |
| UniProt:A0A287MFT4 | MapMan:35.2 | : | : | : | : |
Description
No Description!
Coordinates
chrchr3H:+:655257655..655258801
Molecular Weight (calculated)
29362.7 Da
IEP (calculated)
9.095
GRAVY (calculated)
-0.094
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: PPHPIPPAST LHIHTHTHPL RLLIRRVLQQ LGRPPGRRRR PPGPPLPLHH AAVPRRRPTP PHPGLDLAAR DEAAVGVALV AAWRCFGDGG LDALVNCSSY
101: DGEVQDCLSV SEDEYKKTMK VNVITPWLLI KAMAKRFRDA QSGGSVVCLT QIIGAERGLY PGAAAYGTSL GAVHQLVRLS AMELSKHKIR VNAVCHGLHL
201: GDKFPVSVGE EKAEKATGEE MPLRRWLDPD KDLASTVLYL VGDEGSSFFL LLKNTCCNIT AFVVWGISIA
101: DGEVQDCLSV SEDEYKKTMK VNVITPWLLI KAMAKRFRDA QSGGSVVCLT QIIGAERGLY PGAAAYGTSL GAVHQLVRLS AMELSKHKIR VNAVCHGLHL
201: GDKFPVSVGE EKAEKATGEE MPLRRWLDPD KDLASTVLYL VGDEGSSFFL LLKNTCCNIT AFVVWGISIA
001: MQCTVARLVM MGNEGSLRSI VDKIRDSIEG AFPADVIALD MESDSEVAFH AAVQKAWELS GHFDAFLNSY TYQGKVQDIL QVSQDEFHRI TKINLTAPWF
101: LLKAVATRMK DHGSGGSIVF MATIASGERA LYPGADAYAS TSAAIHQLVR ASAMSLGKHK IRVNMISRGL HLDDEYTASV GRDRAQKLVK DAAPLGQWLN
201: PDTDLYSTVI YLISDGSRFM TGTTVLVDGA QSLTRPRLKS YM
101: LLKAVATRMK DHGSGGSIVF MATIASGERA LYPGADAYAS TSAAIHQLVR ASAMSLGKHK IRVNMISRGL HLDDEYTASV GRDRAQKLVK DAAPLGQWLN
201: PDTDLYSTVI YLISDGSRFM TGTTVLVDGA QSLTRPRLKS YM
Arabidopsis Description
F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.