Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- cytosol 3
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P16020_001 | Banana | cytosol | 77.14 | 30.45 |
| EER90514 | Sorghum | cytosol | 66.67 | 26.22 |
| Zm00001d012849_P001 | Maize | cytosol | 65.71 | 25.65 |
| VIT_14s0068g01760.t01 | Wine grape | cytosol | 63.81 | 25.19 |
| Os03t0850000-01 | Rice | cytosol | 65.71 | 24.91 |
| TraesCS4A01G339500.1 | Wheat | cytosol | 63.81 | 24.45 |
| TraesCS5B01G549100.1 | Wheat | cytosol, peroxisome, plastid | 62.86 | 24.09 |
| PGSC0003DMT400015737 | Potato | cytosol | 60.95 | 24.06 |
| Solyc07g047800.2.1 | Tomato | cytosol, nucleus, plastid | 60.0 | 23.68 |
| KRH03600 | Soybean | cytosol | 59.05 | 23.13 |
| TraesCS5D01G536000.3 | Wheat | endoplasmic reticulum, peroxisome, plastid | 61.9 | 21.89 |
| CDY65036 | Canola | cytosol | 48.57 | 19.39 |
| Bra030964.1-P | Field mustard | cytosol | 47.62 | 19.01 |
| CDY02527 | Canola | cytosol | 47.62 | 19.01 |
| AT3G01980.3 | Thale cress | cytosol | 49.52 | 17.57 |
| HORVU3Hr1G097170.1 | Barley | plastid | 42.86 | 16.67 |
| HORVU7Hr1G092130.2 | Barley | cytosol, nucleus, plastid | 40.0 | 15.73 |
| GSMUA_Achr3P03770_001 | Banana | cytosol | 7.62 | 14.04 |
| GSMUA_Achr3P11750_001 | Banana | cytosol | 23.81 | 9.33 |
| GSMUA_Achr3P28470_001 | Banana | cytosol, mitochondrion | 24.76 | 9.15 |
| GSMUA_Achr3P03760_001 | Banana | cytosol | 23.81 | 8.83 |
| GSMUA_Achr9P12400_001 | Banana | cytosol | 22.86 | 8.36 |
| GSMUA_Achr11P... | Banana | mitochondrion | 20.95 | 7.89 |
| GSMUA_Achr8P17860_001 | Banana | cytosol | 3.81 | 2.25 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P17880_001 | EnsemblPlants:GSMUA_Achr8T17880_001 | EnsemblPlantsGene:GSMUA_Achr8G17880_001 | Gene3D:3.40.50.720 | InterPro:NAD(P)-bd_dom_sf | PANTHER:PTHR43296 |
| PANTHER:PTHR43296:SF2 | PFAM:PF13561 | SUPFAM:SSF51735 | UniParc:UPI00029532A2 | UniProt:M0TRE1 | MapMan:35.2 |
Description
Putative Levodione reductase [Source:GMGC_GENE;Acc:GSMUA_Achr8G17880_001]
Coordinates
chr8:+:19154330..19154733
Molecular Weight (calculated)
12016.7 Da
IEP (calculated)
8.206
GRAVY (calculated)
-0.164
Length
105 amino acids
Sequence
(BLAST)
(BLAST)
001: MFILEFLQHY ICQLSATEIG KHKIRVNAVA RGLQLDDEYP RAMGKEKAEK SIADIMPLLR WLDPKNDVAS TVTYMVGDDC RYMTGTTIFV DGAQSIVRPR
101: MRAYM
101: MRAYM
001: MQCTVARLVM MGNEGSLRSI VDKIRDSIEG AFPADVIALD MESDSEVAFH AAVQKAWELS GHFDAFLNSY TYQGKVQDIL QVSQDEFHRI TKINLTAPWF
101: LLKAVATRMK DHGSGGSIVF MATIASGERA LYPGADAYAS TSAAIHQLVR ASAMSLGKHK IRVNMISRGL HLDDEYTASV GRDRAQKLVK DAAPLGQWLN
201: PDTDLYSTVI YLISDGSRFM TGTTVLVDGA QSLTRPRLKS YM
101: LLKAVATRMK DHGSGGSIVF MATIASGERA LYPGADAYAS TSAAIHQLVR ASAMSLGKHK IRVNMISRGL HLDDEYTASV GRDRAQKLVK DAAPLGQWLN
201: PDTDLYSTVI YLISDGSRFM TGTTVLVDGA QSLTRPRLKS YM
Arabidopsis Description
F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.