Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER90514 | Sorghum | cytosol | 93.68 | 94.38 |
| Os03t0850000-01 | Rice | cytosol | 81.04 | 78.7 |
| TraesCS4A01G339500.1 | Wheat | cytosol | 76.95 | 75.55 |
| TraesCS5B01G549100.1 | Wheat | cytosol, peroxisome, plastid | 76.21 | 74.82 |
| TraesCS5D01G536000.3 | Wheat | endoplasmic reticulum, peroxisome, plastid | 76.58 | 69.36 |
| GSMUA_Achr8P17880_001 | Banana | cytosol | 25.65 | 65.71 |
| GSMUA_Achr4P16020_001 | Banana | cytosol | 60.97 | 61.65 |
| Solyc07g047800.2.1 | Tomato | cytosol, nucleus, plastid | 56.13 | 56.77 |
| VIT_14s0068g01760.t01 | Wine grape | cytosol | 55.76 | 56.39 |
| PGSC0003DMT400015737 | Potato | cytosol | 55.76 | 56.39 |
| HORVU3Hr1G097170.1 | Barley | plastid | 56.51 | 56.3 |
| HORVU7Hr1G092130.2 | Barley | cytosol, nucleus, plastid | 55.76 | 56.18 |
| Bra030964.1-P | Field mustard | cytosol | 54.65 | 55.89 |
| CDY65036 | Canola | cytosol | 54.28 | 55.51 |
| CDY02527 | Canola | cytosol | 53.53 | 54.75 |
| KRH03600 | Soybean | cytosol | 54.28 | 54.48 |
| GSMUA_Achr8P17860_001 | Banana | cytosol | 34.94 | 52.81 |
| AT3G01980.3 | Thale cress | cytosol | 51.3 | 46.62 |
| Zm00001d031453_P001 | Maize | cytosol | 29.0 | 27.86 |
Protein Annotations
| EnsemblPlants:Zm00001d012849_P001 | EnsemblPlants:Zm00001d012849_T001 | EnsemblPlantsGene:Zm00001d012849 | EntrezGene:100285036 | Gene3D:3.40.50.720 | GO:GO:0005575 |
| GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR44375 | PANTHER:PTHR44375:SF2 | PFAM:PF13561 | PRINTS:PR00081 | ProteinID:AQK61582.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI0002219216 | UniProt:A0A1D6GD81 | MapMan:35.2 | : | : |
Description
NAD(P)-binding Rossmann-fold superfamily protein
Coordinates
chr5:+:1082609..1084730
Molecular Weight (calculated)
29055.1 Da
IEP (calculated)
7.286
GRAVY (calculated)
0.035
Length
269 amino acids
Sequence
(BLAST)
(BLAST)
001: MGDADAYAKR VLLTAAGDTV SRGIASTLTK HGCRLVLLGD EGALAATEEE ARRCGVGGGC VELVGLDFKA CGEAAADAAV DRAWRCFAGL DAFVNCYSYE
101: GEVQDCLSIS EDEYMKTIKV NVITPWFLMK AIAKRFQDTK SGGSIVFLTQ IIGAERGLYP GAAAYGTSLG AIHQLVRLCA MELGKHKIRV NAACRGLHLQ
201: DKFPVSVGKE KAEKATAEVM PLRRWLDPEK DLASTVLYLV GDESRYMTGT TIFVDGAQSI VRPRLRSFM
101: GEVQDCLSIS EDEYMKTIKV NVITPWFLMK AIAKRFQDTK SGGSIVFLTQ IIGAERGLYP GAAAYGTSLG AIHQLVRLCA MELGKHKIRV NAACRGLHLQ
201: DKFPVSVGKE KAEKATAEVM PLRRWLDPEK DLASTVLYLV GDESRYMTGT TIFVDGAQSI VRPRLRSFM
001: MENPAKRVLM TSNGDEVSRN IAFHLAKHGC KLVMMGNEGS LRSIVDKIRD SIEGAFPADV IALDMESDSE VAFHAAVQKA WELSGHFDAF LNSYTYQGKV
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL GKHKIRVNMI SRGLHLDDEY
201: TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG SRFMTGTTVL VDGAQSLTRP RLKSYM
101: QDILQVSQDE FHRITKINLT APWFLLKAVA TRMKDHGSGG SIVFMATIAS GERALYPGAD AYASTSAAIH QLVRASAMSL GKHKIRVNMI SRGLHLDDEY
201: TASVGRDRAQ KLVKDAAPLG QWLNPDTDLY STVIYLISDG SRFMTGTTVL VDGAQSLTRP RLKSYM
Arabidopsis Description
F28J7.36 protein [Source:UniProtKB/TrEMBL;Acc:Q9SGI2]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.