Factsheet for Bra007151.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
vacuole 1
plastid 1
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY40209	Canola	peroxisome	66.52	95.51
Bra014757.1-P	Field mustard	cytosol	49.55	79.29
Bra014762.1-P	Field mustard	cytosol	48.44	77.5
Bra014761.1-P	Field mustard	cytosol	43.53	76.77
Bra002097.1-P	Field mustard	cytosol	46.88	75.54
Bra040871.1-P	Field mustard	cytosol	46.88	75.54
Bra014760.1-P	Field mustard	plastid	38.62	75.22
Bra036706.1-P	Field mustard	cytosol	47.1	73.52
Bra024488.1-P	Field mustard	plastid	23.44	70.95
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	40.18	66.42
AT2G17845.1	Thale cress	golgi, peroxisome, plastid	45.76	65.71
Solyc12g100220.1.1	Tomato	plastid	39.51	65.31
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	33.48	65.22
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	19.64	65.19
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	38.62	64.07
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	38.62	63.6
PGSC0003DMT400072205	Potato	cytosol	40.62	62.76
PGSC0003DMT400088158	Potato	cytosol	35.94	62.65
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	12.72	62.64
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	37.72	62.59
Solyc10g080890.1.1	Tomato	cytosol	39.96	61.72
Solyc12g045030.1.1	Tomato	nucleus	37.28	61.62
VIT_08s0040g01190.t01	Wine grape	cytosol	39.29	61.54
VIT_08s0040g01200.t01	Wine grape	cytosol	39.29	61.54
Solyc10g080900.1.1	Tomato	plastid	39.29	61.32
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	37.05	61.25
Solyc10g006860.2.1	Tomato	plastid	37.05	60.14
Solyc12g044940.1.1	Tomato	nucleus	36.16	59.78
KRH71621	Soybean	cytosol	37.05	58.87
KRH71588	Soybean	cytosol	37.05	58.87
Os08t0510400-01	Rice	plastid	37.28	58.8
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	35.27	58.3
EES14264	Sorghum	cytosol, plastid	35.71	57.35
Zm00001d031453_P001	Maize	cytosol	35.71	57.14
PGSC0003DMT400062814	Potato	cytosol	12.72	57.0
TraesCS7A01G427800.1	Wheat	mitochondrion	35.04	56.27
TraesCS7D01G245700.1	Wheat	cytosol	35.49	56.18
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	34.6	55.56
TraesCS7A01G246900.1	Wheat	plastid	35.04	55.48
TraesCS7B01G144400.1	Wheat	cytosol	34.82	55.12
TraesCS2D01G531000.1	Wheat	plastid	33.71	54.12
HORVU7Hr1G050760.2	Barley	vacuole	35.94	51.6
Solyc12g036510.1.1	Tomato	cytosol	25.67	48.73
HORVU2Hr1G116450.1	Barley	plastid	33.93	47.95
VIT_08s0040g01210.t01	Wine grape	cytosol	29.02	45.94
KRH76339	Soybean	cytosol	11.38	45.13
Bra030964.1-P	Field mustard	cytosol	15.85	27.0

Protein Annotations

MapMan:17.1.2.1.24	Gene3D:3.30.70.330	Gene3D:3.40.50.720	EnsemblPlantsGene:Bra007151	EnsemblPlants:Bra007151.1	EnsemblPlants:Bra007151.1-P
GO:GO:0003674	GO:GO:0003735	GO:GO:0003824	GO:GO:0005198	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005840	GO:GO:0006412	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0016491	GO:GO:0019538	GO:GO:0055114	InterPro:IPR012677
UniProt:M4CSF9	HAMAP:MF_01369_A	InterPro:NAD(P)-bd_dom_sf	InterPro:Nucleotide-bd_a/b_plait_sf	PFAM:PF00106	PFAM:PF00276
PFAM:PF03939	PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR44375	PANTHER:PTHR44375:SF1
InterPro:Ribosomal_L23/L15e_core_dom_sf	InterPro:Ribosomal_L23/L25_N	InterPro:Ribosomal_L25/23	InterPro:SDR_fam	SUPFAM:SSF51735	SUPFAM:SSF54189
InterPro:Sc_DH/Rdtase_CS	UniParc:UPI0002542A2A	SEG:seg	:	:	:

Description

AT3G55290 (E=2e-127) | short-chain dehydrogenase/reductase (SDR) family protein

Coordinates

chrA09:+:27584591..27587163

Molecular Weight (calculated)

49502.4 Da

IEP (calculated)

10.325

GRAVY (calculated)

-0.298

Length

448 amino acids

Sequence
(BLAST)

001: MAPAKVDVTK KPDPKAKALK AAKAVKSGQI IKKKAKKIRT KVTFHRPKTL TKARDPKYPR ISATPRNKLD HYGILKYPLT TESAMKKIED NNTLVFIVDI
101: RADKKKIKDA VKKMYDIQTK KVNTLIRPDG TKKAYVRLTP DYDALDCLDE AAGDFGERDS FTVRNTMSSN HQTVMKQLEP WCELKDKVVL LTGASSGIGR
201: EICLDLAKSG CKIIAAARRL DRLQSLCSEI NAFSTKTKLA APLELDVSSD SSTIQNAVKQ AWDIFGHIDV LINNAGIRGN VRSSLDLSEE EWERVFRTNL
301: TGPWLVSKHV CVLMRDAKRG GGSVINVSSI AGLQRGKLPG ALAYACSKGG LDIMTKMMAV EMGEYGIRVN SIAPGLFKSE ITEGLMRKEW MKNVRERTVP
401: LKVQQSVDPG LTSLVRYLIH DSSRYVSGNV YIVDAGSTLS GLPIFSSL

Best Arabidopsis Sequence Match ( AT3G55290.2 )
(BLAST)

001: MSNHQTVLKL LEPWCELKDK VVLVTGASSG IGREICLDLA KAGCQVIAAA RRVDRLNSLC SEINSFSSTG IQAAALELDV SSDAATIQKA VREAWDIFGK
101: IDALINNAGI RGNVKSSLDL SEDEWDNVFK TNLKGPWLVS KHVCMLMRDA KRGGSVINIS SIAGIRGMLP GGLAYACSKG GVDTMSRMMA LELGVHKIRV
201: NSIAPGLFKS EITQGLMQKE WLKNVTERTV PLKVQQTVDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.