Factsheet for AT2G17845.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plastid

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT3G55290.1	Thale cress	cytosol	72.76	81.07
CDY07814	Canola	cytosol	71.79	80.58
CDY29203	Canola	cytosol	71.79	80.58
Bra040871.1-P	Field mustard	cytosol	71.79	80.58
AT3G55310.1	Thale cress	cytosol	71.15	79.57
CDX76107	Canola	cytosol, nucleus, peroxisome	69.87	77.86
Bra014757.1-P	Field mustard	cytosol	69.87	77.86
Bra014761.1-P	Field mustard	cytosol	62.82	77.17
CDX73333	Canola	cytosol, nucleus, peroxisome	68.91	76.79
CDY65313	Canola	cytosol, nucleus, peroxisome	68.91	76.24
CDY44938	Canola	cytosol, peroxisome, plastid	69.23	76.06
AT1G62610.4	Thale cress	cytosol, nucleus, peroxisome	68.59	75.89
Bra014762.1-P	Field mustard	cytosol	67.95	75.71
Bra024488.1-P	Field mustard	plastid	35.9	75.68
CDY29207	Canola	plastid	35.9	75.68
Bra002097.1-P	Field mustard	cytosol	67.31	75.54
Bra014760.1-P	Field mustard	plastid	55.45	75.22
CDY07809	Canola	plastid	35.58	75.0
AT3G46170.1	Thale cress	cytosol, extracellular, peroxisome	68.91	74.65
AT1G63380.2	Thale cress	cytosol	68.27	74.22
CDY02920	Canola	cytosol	50.96	67.09
PGSC0003DMT400088158	Potato	cytosol	54.17	65.76
CDY40209	Canola	peroxisome	65.38	65.38
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	56.73	65.31
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	48.08	65.22
Solyc12g100220.1.1	Tomato	plastid	55.45	63.84
VIT_08s0040g01190.t01	Wine grape	cytosol	58.01	63.29
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	27.24	62.96
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	54.81	62.87
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	53.85	62.22
VIT_08s0040g01200.t01	Wine grape	cytosol	56.41	61.54
KRH71621	Soybean	cytosol	55.45	61.35
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	52.56	60.74
Solyc10g006860.2.1	Tomato	plastid	53.53	60.51
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	17.63	60.44
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	51.92	59.78
Solyc12g044940.1.1	Tomato	nucleus	51.6	59.41
Solyc12g045030.1.1	Tomato	nucleus	51.6	59.41
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	51.28	59.04
KRH71588	Soybean	cytosol	53.21	58.87
PGSC0003DMT400072205	Potato	cytosol	54.17	58.28
Solyc10g080890.1.1	Tomato	cytosol	54.17	58.28
Solyc10g080900.1.1	Tomato	plastid	53.21	57.84
Os08t0510400-01	Rice	plastid	52.56	57.75
TraesCS7A01G427800.1	Wheat	mitochondrion	51.28	57.35
EES14264	Sorghum	cytosol, plastid	50.96	56.99
TraesCS7D01G245700.1	Wheat	cytosol	51.6	56.89
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	50.64	56.63
TraesCS7A01G246900.1	Wheat	plastid	51.28	56.54
Zm00001d031453_P001	Maize	cytosol	50.64	56.43
PGSC0003DMT400062814	Potato	cytosol	17.95	56.0
TraesCS7B01G144400.1	Wheat	cytosol	50.64	55.83
TraesCS2D01G531000.1	Wheat	plastid	49.36	55.2
HORVU7Hr1G050760.2	Barley	vacuole	52.56	52.56
HORVU2Hr1G116450.1	Barley	plastid	48.4	47.63
Solyc12g036510.1.1	Tomato	cytosol	34.94	46.19
KRH76339	Soybean	cytosol	16.67	46.02
Bra007151.1-P	Field mustard	cytosol	65.71	45.76
VIT_08s0040g01210.t01	Wine grape	cytosol	41.35	45.58
CDX73391	Canola	cytosol	66.35	44.14
AT3G01980.3	Thale cress	cytosol	25.96	27.36

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	EntrezGene:816294	ProteinID:AEC06694.1	ArrayExpress:AT2G17845	EnsemblPlantsGene:AT2G17845
RefSeq:AT2G17845	TAIR:AT2G17845	RefSeq:AT2G17845-TAIR-G	EnsemblPlants:AT2G17845.1	TAIR:AT2G17845.1	UniProt:F4IPI3
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491	GO:GO:0055114
InterPro:NAD(P)-bd_dom_sf	RefSeq:NP_565425.1	PFAM:PF00106	PO:PO:0000056	PO:PO:0006504	PO:PO:0007611
PO:PO:0007616	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009067	PO:PO:0025281
PRINTS:PR00080	PRINTS:PR00081	ScanProsite:PS00061	PANTHER:PTHR44375	PANTHER:PTHR44375:SF1	InterPro:SDR_fam
SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS	UniParc:UPI000016235E	SEG:seg	:	:

Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4IPI3]

Coordinates

chr2:+:7758846..7759881

Molecular Weight (calculated)

34324.9 Da

IEP (calculated)

9.591

GRAVY (calculated)

0.038

Length

312 amino acids

Sequence
(BLAST)

001: MSFWFRDKSL YVMGISFSTK EHTKRNNMSN HQTVREILLL LYLTCELKDK VVLVTGASSG IGREVCLDLA KAGCKIIAAA RRVDRLKSLC SEINRFEYSA
101: GIQAEALELD VSSDAATVQK AVKKAWEIFG KIDALINNAG FRGNVKSSLD LSEDEWDKVF KTNLTGTWLV SKYVCILMRD AKRGGGSVIN ISSVSWLHRG
201: QVPGGVAYAC SKGGVDTMTR MMALELGVYK IRVNSIAPGL LKSEITQGLM QKEWLKTVIE RTVPLKVQQT VDPGLTSLLR YLVHDSSKYI SGNTYIVDAG
301: ASLVGLPIFS SL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.