Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- peroxisome 1
- plastid 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra040871.1-P | Field mustard | cytosol | 100.0 | 100.0 |
| CDY07814 | Canola | cytosol | 97.84 | 97.84 |
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 81.3 | 80.71 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 80.58 | 80.0 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 80.22 | 79.08 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 79.5 | 78.93 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 80.58 | 78.87 |
| CDY29207 | Canola | plastid | 41.37 | 77.7 |
| CDY07809 | Canola | plastid | 41.01 | 77.03 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 78.06 | 75.61 |
| CDY02920 | Canola | cytosol | 61.51 | 72.15 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 80.58 | 71.79 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 65.47 | 67.16 |
| CDY40209 | Canola | peroxisome | 75.18 | 66.99 |
| PGSC0003DMT400088158 | Potato | cytosol | 60.07 | 64.98 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 53.6 | 64.78 |
| Solyc12g100220.1.1 | Tomato | plastid | 62.95 | 64.58 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 62.59 | 64.44 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 64.75 | 62.94 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 61.51 | 62.87 |
| PGSC0003DMT400072205 | Potato | cytosol | 65.47 | 62.76 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 60.79 | 62.59 |
| Solyc12g045030.1.1 | Tomato | nucleus | 60.79 | 62.36 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 30.22 | 62.22 |
| Solyc12g044940.1.1 | Tomato | nucleus | 60.43 | 61.99 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 60.43 | 61.99 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 60.43 | 61.99 |
| Solyc10g080890.1.1 | Tomato | cytosol | 64.39 | 61.72 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 63.31 | 61.54 |
| KRH71621 | Soybean | cytosol | 61.15 | 60.28 |
| Solyc10g080900.1.1 | Tomato | plastid | 61.87 | 59.93 |
| Solyc10g006860.2.1 | Tomato | plastid | 59.35 | 59.78 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 19.42 | 59.34 |
| KRH71588 | Soybean | cytosol | 60.07 | 59.22 |
| Os08t0510400-01 | Rice | plastid | 59.35 | 58.1 |
| EES14264 | Sorghum | cytosol, plastid | 58.27 | 58.06 |
| Zm00001d031453_P001 | Maize | cytosol | 57.91 | 57.5 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 58.27 | 57.24 |
| TraesCS7A01G246900.1 | Wheat | plastid | 57.91 | 56.89 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 56.83 | 56.63 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 57.19 | 56.18 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 55.4 | 55.2 |
| TraesCS2D01G531000.1 | Wheat | plastid | 55.04 | 54.84 |
| PGSC0003DMT400062814 | Potato | cytosol | 19.06 | 53.0 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 58.27 | 51.92 |
| Solyc12g036510.1.1 | Tomato | cytosol | 40.29 | 47.46 |
| HORVU2Hr1G116450.1 | Barley | plastid | 53.96 | 47.32 |
| CDX73391 | Canola | cytosol | 76.98 | 45.63 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 46.04 | 45.23 |
| KRH76339 | Soybean | cytosol | 16.91 | 41.59 |
| CDX91138 | Canola | cytosol, plastid | 21.58 | 37.27 |
| CDY65036 | Canola | cytosol | 26.62 | 28.14 |
| CDY02527 | Canola | cytosol | 26.26 | 27.76 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 13.31 | 15.16 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078GX64 | UniProt:A0A078GX64 | EnsemblPlants:CDY29203 | ProteinID:CDY29203 |
| ProteinID:CDY29203.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00042108001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI000253E9D6 | SEG:seg | : | : | : | : |
Description
BnaA06g25540DBnaA06g25540D protein [Source:UniProtKB/TrEMBL;Acc:A0A078GX64]
Coordinates
chrLK032233:+:195635..196578
Molecular Weight (calculated)
29873.2 Da
IEP (calculated)
8.702
GRAVY (calculated)
0.058
Length
278 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNLQTVSKQ QEPWCELKDK VVLVTGASSG IGREICLDLA KAGCKIIAAA RRVDRLKSLC SEINTTGVQA AALELDVSSD AATIQQAVKE AWEAFGKIDA
101: LVNNAGIRGT VKSSLDLSEN EWDKVFKTNL TGAWLVSKYV CILMRDAKDR GGSVINISSI SGLHRGVVPG GIAYATSKGG VDTMTRVMAI ELGVYNIRVN
201: SIAPGLLESE MTQGLMKKKW LKNVTERTIP LKVQQTVDPG ITSLVRYLIH DSSQYVSGNI YILDSGATVP GLPIFSSL
101: LVNNAGIRGT VKSSLDLSEN EWDKVFKTNL TGAWLVSKYV CILMRDAKDR GGSVINISSI SGLHRGVVPG GIAYATSKGG VDTMTRVMAI ELGVYNIRVN
201: SIAPGLLESE MTQGLMKKKW LKNVTERTIP LKVQQTVDPG ITSLVRYLIH DSSQYVSGNI YILDSGATVP GLPIFSSL
001: MSNHQTVLKQ LEPWCELKDK VVLVTGASSG IGREICLDLC KAGCKIVAAA RRVDRLNSLC SEINSFGAIG VQAVALELDV SSEADTIRKA VKEAWETFGK
101: IDVLINNAGI RGNVKSSLDL SEEEWDKVFR TNLTGSWLIS KYVCLLMRDA ERGGSVINVS SISGLHRGLL RGGLAYACSK GGVDTMTRMM AIELAVYKIR
201: VNSIAPGIFR SEITQGLFQK EWLKKVTEKV VPLKMQQTVD PGLTSLVRYL IHDSSQYVTG NTYIVDSGTT LPGVPIFSSL SP
101: IDVLINNAGI RGNVKSSLDL SEEEWDKVFR TNLTGSWLIS KYVCLLMRDA ERGGSVINVS SISGLHRGLL RGGLAYACSK GGVDTMTRMM AIELAVYKIR
201: VNSIAPGIFR SEITQGLFQK EWLKKVTEKV VPLKMQQTVD PGLTSLVRYL IHDSSQYVTG NTYIVDSGTT LPGVPIFSSL SP
Arabidopsis Description
F2K11.24 [Source:UniProtKB/TrEMBL;Acc:Q9SH24]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.