CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	peroxisome
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY29203	Canola	cytosol	97.84	97.84
CDX76107	Canola	cytosol, nucleus, peroxisome	80.94	80.36
CDX73333	Canola	cytosol, nucleus, peroxisome	80.22	79.64
CDY65313	Canola	cytosol, nucleus, peroxisome	79.86	78.72
CDY44938	Canola	cytosol, peroxisome, plastid	80.22	78.52
CDY03343	Canola	cytosol, nucleus, peroxisome	78.78	78.21
CDY29207	Canola	plastid	41.01	77.03
CDY07809	Canola	plastid	40.65	76.35
CDY48725	Canola	cytosol, peroxisome, plastid	78.06	75.61
AT2G17845.1	Thale cress	golgi, peroxisome, plastid	80.58	71.79
CDY02920	Canola	cytosol	61.15	71.73
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	65.11	66.79
CDY40209	Canola	peroxisome	74.46	66.35
PGSC0003DMT400088158	Potato	cytosol	59.35	64.2
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	61.87	63.7
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	52.52	63.48
Solyc12g100220.1.1	Tomato	plastid	61.87	63.47
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	61.15	62.5
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	30.22	62.22
VIT_08s0040g01190.t01	Wine grape	cytosol	63.67	61.89
PGSC0003DMT400072205	Potato	cytosol	64.39	61.72
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	59.71	61.48
Solyc12g045030.1.1	Tomato	nucleus	59.71	61.25
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	59.35	60.89
Solyc12g044940.1.1	Tomato	nucleus	59.35	60.89
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	59.35	60.89
Solyc10g080890.1.1	Tomato	cytosol	63.31	60.69
VIT_08s0040g01200.t01	Wine grape	cytosol	62.23	60.49
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	19.78	60.44
KRH71621	Soybean	cytosol	60.43	59.57
Solyc10g080900.1.1	Tomato	plastid	60.79	58.88
Solyc10g006860.2.1	Tomato	plastid	58.27	58.7
KRH71588	Soybean	cytosol	58.99	58.16
Os08t0510400-01	Rice	plastid	58.63	57.39
EES14264	Sorghum	cytosol, plastid	57.55	57.35
Zm00001d031453_P001	Maize	cytosol	57.19	56.79
TraesCS7D01G245700.1	Wheat	cytosol	57.55	56.54
TraesCS7A01G246900.1	Wheat	plastid	57.19	56.18
TraesCS7A01G427800.1	Wheat	mitochondrion	56.12	55.91
TraesCS7B01G144400.1	Wheat	cytosol	56.47	55.48
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	54.68	54.48
TraesCS2D01G531000.1	Wheat	plastid	54.32	54.12
PGSC0003DMT400062814	Potato	cytosol	19.06	53.0
HORVU7Hr1G050760.2	Barley	vacuole	57.55	51.28
HORVU2Hr1G116450.1	Barley	plastid	53.24	46.69
Solyc12g036510.1.1	Tomato	cytosol	39.57	46.61
CDX73391	Canola	cytosol	76.26	45.2
VIT_08s0040g01210.t01	Wine grape	cytosol	45.32	44.52
KRH76339	Soybean	cytosol	16.91	41.59
CDX91138	Canola	cytosol, plastid	21.22	36.65
CDY65036	Canola	cytosol	26.26	27.76
CDY02527	Canola	cytosol	25.9	27.38
CDX69242	Canola	cytosol, nucleus, plasma membrane, plastid	13.67	15.57

Protein Annotations

Gene3D:3.40.50.720	MapMan:35.1	GO:A0A078F431	UniProt:A0A078F431	EnsemblPlants:CDY07814	ProteinID:CDY07814
ProteinID:CDY07814.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016491
GO:GO:0055114	EnsemblPlantsGene:GSBRNA2T00124959001	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00106	PRINTS:PR00080	PRINTS:PR00081
ScanProsite:PS00061	PANTHER:PTHR44375	PANTHER:PTHR44375:SF1	InterPro:SDR_fam	SUPFAM:SSF51735	InterPro:Sc_DH/Rdtase_CS
UniParc:UPI0004EDD1E4	SEG:seg	:	:	:	:

Description

BnaC03g48080DBnaC03g48080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F431]

Coordinates

chrLK031981:-:178674..179606

Molecular Weight (calculated)

29916.4 Da

IEP (calculated)

9.165

GRAVY (calculated)

0.083

Length

278 amino acids

Sequence
(BLAST)

001: MSNLQTVSKQ QEPWCELKDI VVLVTGASSG IGREICLDLA KAGCKIIAAA RRVDRLKSLC SEINTTGVQS AALELDVSSD AATIQKAVKE AWEVFGKIDA
101: LVNNAGIRGT VKSSLDLSEK EWDKVFKTNL TGAWLVSKYV CILMRDAKDR GGSVINISSI SGLHRGVVPG GIAYATSKGG VDTMTRVMAI ELGVYNIRVN
201: SIAPGLLESE MTQGLMKKKW LKNVTERTIP LKVQQTVDPG ITSLVRYLIH DSSKYVSGNI YILDSGATVP GLPIFSSL

Best Arabidopsis Sequence Match ( AT1G62610.4 )
(BLAST)

001: MSNHQTKQVL KQLEPWCELK DKVVLVTGAS SGIGREICLD LCKAGCKIVA AARRVDRLNS LCSEINSFGA IGVQAAALEL DVSSDADTIR KAVKEAWEIF
101: GTIDVLINNA GIRGNVKSSL DLSKEEWDKV FRTNLTGSWL ISKYVCLLMR DAKRGGSVIN VSSISGLHRG LLRGGLAYAC SKGGVDTMTR MMAIELAVYK
201: IRVNSIAPGI FRSEITQGLF QKEWLEKVTE KIVPLKMQQT VDPGLTSLVR YLIHDSSQYV TGNTYIVDSG ATLPGVPIFS SL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [peroxisome,nucleus,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.