Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, plastid, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 3
- golgi 2
- nucleus 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY29207 | Canola | plastid | 9.84 | 16.22 |
| CDY07809 | Canola | plastid | 9.02 | 14.86 |
| CDY07814 | Canola | cytosol | 15.57 | 13.67 |
| CDY29203 | Canola | cytosol | 15.16 | 13.31 |
| CDY02920 | Canola | cytosol | 12.7 | 13.08 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 14.75 | 12.86 |
| CDY40209 | Canola | peroxisome | 16.39 | 12.82 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 14.75 | 12.68 |
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 14.34 | 12.5 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 14.34 | 12.5 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 14.34 | 12.41 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 14.34 | 12.2 |
| CDY65036 | Canola | cytosol | 12.7 | 11.79 |
| CDY02527 | Canola | cytosol | 12.3 | 11.41 |
| CDX73391 | Canola | cytosol | 16.39 | 8.53 |
| CDX91138 | Canola | cytosol, plastid | 4.51 | 6.83 |
Protein Annotations
| EnsemblPlants:CDX69242 | EnsemblPlantsGene:GSBRNA2T00131049001 | Gene3D:3.40.50.720 | GO:A0A078BY27 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | PFAM:PF00106 | ProteinID:CDX69242 | ProteinID:CDX69242.1 | SEG:seg |
| SUPFAM:SSF51735 | TMHMM:TMhelix | UniParc:UPI0004EEF125 | MapMan:35.2 | : | : |
Description
BnaC01g02110D
Coordinates
chrLK031789:-:3685122..3685989
Molecular Weight (calculated)
26564.4 Da
IEP (calculated)
9.998
GRAVY (calculated)
0.016
Length
244 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETYLEDTC WQITFSFLSF VLCLSLAHNL RPEKSRKKRQ RSQPAAGRKS SNPSSLPPPS PINAGESVVA GTTGKAKKKA GGARDLRILS PVLWSAIRAQ
101: SSNCVDEVGA MADLKDKVVL VTGASSGIGK EICLDLVKAG CKIIAAAHRV DRLNSLCSNI NSFGSTGTQA TALELDVASV QPPFEKRLRK LGKYLAYLQS
201: DVGLIITLVH CETLFYLKKL ARNLIGFVTS RFYYGHITII CFLK
101: SSNCVDEVGA MADLKDKVVL VTGASSGIGK EICLDLVKAG CKIIAAAHRV DRLNSLCSNI NSFGSTGTQA TALELDVASV QPPFEKRLRK LGKYLAYLQS
201: DVGLIITLVH CETLFYLKKL ARNLIGFVTS RFYYGHITII CFLK
001: MSNHQTVLKQ LEPWCELKDK VVLVTGASSG IGREICLDLA KAGCQVIAAA RRVDRLNSLC SEINSFSSTG IQAAALELDV SSDAATIQKA VREAWDIFGK
101: IDALINNAGI RGNVKLSLDL SEDEWDNVFN TNLKGPWLVA KYVCVLMRDA KRGGSVINIS SVAGVRSIVP GGLAYSCSKG GVDTMSRMMA IELGVHKIRV
201: NSIAPGLFKS EITQALMQKE WLKNVTERTV PLKVQQTIDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
101: IDALINNAGI RGNVKLSLDL SEDEWDNVFN TNLKGPWLVA KYVCVLMRDA KRGGSVINIS SVAGVRSIVP GGLAYSCSKG GVDTMSRMMA IELGVHKIRV
201: NSIAPGLFKS EITQALMQKE WLKNVTERTV PLKVQQTIDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
Arabidopsis Description
Beta-ketoacyl-ACP reductase-like protein [Source:UniProtKB/TrEMBL;Acc:Q67Z59]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.