Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra014757.1-P | Field mustard | cytosol | 97.86 | 97.86 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 95.0 | 94.33 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 91.43 | 91.43 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 91.07 | 89.79 |
| CDY29203 | Canola | cytosol | 80.71 | 81.3 |
| CDY07814 | Canola | cytosol | 80.36 | 80.94 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 80.71 | 80.71 |
| CDY02920 | Canola | cytosol | 68.21 | 80.59 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 80.0 | 78.05 |
| CDY29207 | Canola | plastid | 41.07 | 77.7 |
| CDY07809 | Canola | plastid | 41.07 | 77.7 |
| CDY40209 | Canola | peroxisome | 79.64 | 71.47 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 77.86 | 69.87 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 55.0 | 66.96 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 63.21 | 65.31 |
| Solyc12g100220.1.1 | Tomato | plastid | 62.5 | 64.58 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 31.07 | 64.44 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 61.79 | 64.07 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 61.79 | 63.6 |
| PGSC0003DMT400088158 | Potato | cytosol | 57.86 | 63.03 |
| Solyc12g045030.1.1 | Tomato | nucleus | 60.0 | 61.99 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 63.21 | 61.89 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 59.64 | 61.85 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 59.64 | 61.62 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 20.0 | 61.54 |
| KRH71621 | Soybean | cytosol | 61.79 | 61.35 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 62.14 | 60.84 |
| PGSC0003DMT400072205 | Potato | cytosol | 62.5 | 60.34 |
| Solyc10g006860.2.1 | Tomato | plastid | 58.93 | 59.78 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 57.86 | 59.78 |
| Solyc12g044940.1.1 | Tomato | nucleus | 57.5 | 59.41 |
| Solyc10g080890.1.1 | Tomato | cytosol | 61.07 | 58.97 |
| Solyc10g080900.1.1 | Tomato | plastid | 60.36 | 58.88 |
| KRH71588 | Soybean | cytosol | 59.29 | 58.87 |
| Zm00001d031453_P001 | Maize | cytosol | 57.5 | 57.5 |
| Os08t0510400-01 | Rice | plastid | 58.21 | 57.39 |
| EES14264 | Sorghum | cytosol, plastid | 57.14 | 57.35 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 56.43 | 55.83 |
| TraesCS7A01G246900.1 | Wheat | plastid | 56.07 | 55.48 |
| PGSC0003DMT400062814 | Potato | cytosol | 19.64 | 55.0 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 54.64 | 54.84 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 54.64 | 54.84 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 55.36 | 54.77 |
| TraesCS2D01G531000.1 | Wheat | plastid | 54.29 | 54.48 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 56.43 | 50.64 |
| Solyc12g036510.1.1 | Tomato | cytosol | 41.79 | 49.58 |
| CDX73391 | Canola | cytosol | 80.71 | 48.19 |
| HORVU2Hr1G116450.1 | Barley | plastid | 52.86 | 46.69 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 45.36 | 44.88 |
| KRH76339 | Soybean | cytosol | 17.86 | 44.25 |
| CDX91138 | Canola | cytosol, plastid | 20.0 | 34.78 |
| CDY65036 | Canola | cytosol | 25.36 | 27.0 |
| CDY02527 | Canola | cytosol | 25.36 | 27.0 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 12.5 | 14.34 |
Protein Annotations
| EnsemblPlants:CDX76107 | EnsemblPlantsGene:GSBRNA2T00126378001 | Gene3D:3.40.50.720 | GO:A0A078CH93 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam | InterPro:Sc_DH/Rdtase_CS |
| PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 | ProteinID:CDX76107 |
| ProteinID:CDX76107.1 | ScanProsite:PS00061 | SUPFAM:SSF51735 | UniParc:UPI0004EE34AD | MapMan:35.1 | : |
Description
BnaA04g03710D
Coordinates
chrLK031806:-:887737..889069
Molecular Weight (calculated)
30208.7 Da
IEP (calculated)
8.577
GRAVY (calculated)
0.039
Length
280 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNHQTTKQL EPWCELKDKV VLLTGASSGI GREVCLDLGK AGCKIIAAAR RVDRLESLCS EINSLSSTGI QLAAPLELDV SSDAATIQKA VKQAWDIFGK
101: IDVLINNAGI RGNVKTSLDL TEDEWNTVFR TNLSGPWLVS KYVCSLMRDA KRGGSVINVS SIAGLHRGLL PGGVAYACSK GGVDTMTRMM AIELGVYNIR
201: VNSIAPGLLK SEITQGLMQK EWLKNVTERS IPLKVQQTVD PGLTSLVRYL IHDSSRYVSG NTYILDSGAT IPGLPIFSSL
101: IDVLINNAGI RGNVKTSLDL TEDEWNTVFR TNLSGPWLVS KYVCSLMRDA KRGGSVINVS SIAGLHRGLL PGGVAYACSK GGVDTMTRMM AIELGVYNIR
201: VNSIAPGLLK SEITQGLMQK EWLKNVTERS IPLKVQQTVD PGLTSLVRYL IHDSSRYVSG NTYILDSGAT IPGLPIFSSL
001: MSNHQTVLKL LEPWCELKDK VVLVTGASSG IGREICLDLA KAGCQVIAAA RRVDRLNSLC SEINSFSSTG IQAAALELDV SSDAATIQKA VREAWDIFGK
101: IDALINNAGI RGNVKSSLDL SEDEWDNVFK TNLKGPWLVS KHVCMLMRDA KRGGSVINIS SIAGIRGMLP GGLAYACSKG GVDTMSRMMA LELGVHKIRV
201: NSIAPGLFKS EITQGLMQKE WLKNVTERTV PLKVQQTVDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
101: IDALINNAGI RGNVKSSLDL SEDEWDNVFK TNLKGPWLVS KHVCMLMRDA KRGGSVINIS SIAGIRGMLP GGLAYACSKG GVDTMSRMMA LELGVHKIRV
201: NSIAPGLFKS EITQGLMQKE WLKNVTERTV PLKVQQTVDP GLTSLVRYLI HDSSQYISGN TYIVDSGATL PGVPIFSSL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.