Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, nucleus, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- peroxisome 1
- mitochondrion 1
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 94.33 | 95.0 |
| Bra014760.1-P | Field mustard | plastid | 74.47 | 91.3 |
| Bra014761.1-P | Field mustard | cytosol | 81.91 | 90.94 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 89.01 | 89.64 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 89.01 | 88.38 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 79.79 | 80.36 |
| CDY29203 | Canola | cytosol | 79.08 | 80.22 |
| CDY07814 | Canola | cytosol | 78.72 | 79.86 |
| CDY02920 | Canola | cytosol | 65.96 | 78.48 |
| CDY07809 | Canola | plastid | 41.13 | 78.38 |
| CDY29207 | Canola | plastid | 41.13 | 78.38 |
| CDY48725 | Canola | cytosol, peroxisome, plastid | 79.43 | 78.05 |
| CDY40209 | Canola | peroxisome | 79.43 | 71.79 |
| AT2G17845.1 | Thale cress | golgi, peroxisome, plastid | 76.24 | 68.91 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 54.61 | 66.96 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 62.77 | 65.31 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 31.21 | 65.19 |
| Solyc12g100220.1.1 | Tomato | plastid | 62.06 | 64.58 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 61.7 | 64.44 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 60.99 | 63.24 |
| PGSC0003DMT400088158 | Potato | cytosol | 56.74 | 62.26 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 63.12 | 62.24 |
| Solyc12g045030.1.1 | Tomato | nucleus | 59.57 | 61.99 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 59.22 | 61.85 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 59.22 | 61.62 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 19.86 | 61.54 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 62.06 | 61.19 |
| KRH71621 | Soybean | cytosol | 60.64 | 60.64 |
| PGSC0003DMT400072205 | Potato | cytosol | 61.7 | 60.0 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 57.45 | 59.78 |
| Solyc10g006860.2.1 | Tomato | plastid | 58.16 | 59.42 |
| Solyc12g044940.1.1 | Tomato | nucleus | 57.09 | 59.41 |
| Solyc10g080890.1.1 | Tomato | cytosol | 60.28 | 58.62 |
| Solyc10g080900.1.1 | Tomato | plastid | 59.22 | 58.19 |
| KRH71588 | Soybean | cytosol | 57.45 | 57.45 |
| Os08t0510400-01 | Rice | plastid | 57.8 | 57.39 |
| EES14264 | Sorghum | cytosol, plastid | 56.38 | 56.99 |
| Zm00001d031453_P001 | Maize | cytosol | 56.03 | 56.43 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 55.32 | 55.12 |
| PGSC0003DMT400062814 | Potato | cytosol | 19.5 | 55.0 |
| TraesCS7A01G246900.1 | Wheat | plastid | 54.96 | 54.77 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 53.55 | 54.12 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 54.26 | 54.06 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 52.84 | 53.41 |
| TraesCS2D01G531000.1 | Wheat | plastid | 52.48 | 53.05 |
| Solyc12g036510.1.1 | Tomato | cytosol | 41.84 | 50.0 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 55.32 | 50.0 |
| CDX73391 | Canola | cytosol | 80.5 | 48.4 |
| HORVU2Hr1G116450.1 | Barley | plastid | 51.42 | 45.74 |
| KRH76339 | Soybean | cytosol | 17.73 | 44.25 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 43.62 | 43.46 |
| CDX91138 | Canola | cytosol, plastid | 18.44 | 32.3 |
| CDY02527 | Canola | cytosol | 25.18 | 27.0 |
| CDY65036 | Canola | cytosol | 25.18 | 27.0 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 12.41 | 14.34 |
Protein Annotations
| Gene3D:3.40.50.720 | MapMan:35.1 | GO:A0A078JCH8 | UniProt:A0A078JCH8 | EnsemblPlants:CDY65313 | ProteinID:CDY65313 |
| ProteinID:CDY65313.1 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0016491 |
| GO:GO:0055114 | EnsemblPlantsGene:GSBRNA2T00045589001 | InterPro:NAD(P)-bd_dom_sf | PFAM:PF00106 | PRINTS:PR00080 | PRINTS:PR00081 |
| ScanProsite:PS00061 | PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | InterPro:SDR_fam | SUPFAM:SSF51735 | InterPro:Sc_DH/Rdtase_CS |
| UniParc:UPI0004EE8033 | : | : | : | : | : |
Description
BnaCnng46610DBnaCnng46610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JCH8]
Coordinates
chrLK034728:-:16369..17472
Molecular Weight (calculated)
30232.7 Da
IEP (calculated)
8.358
GRAVY (calculated)
0.094
Length
282 amino acids
Sequence
(BLAST)
(BLAST)
001: MSNHQTTVLK QLEPWCELNG KVVLLTGASS GIGSEVCLDL GKAGCKIIAA ARRVHRLESL CSEINSLSST GIQLAAPLEL DVSSDAATIQ KAVKQAWDIY
101: GKIDVLINNA GIRGNVKTSL DLTEDEWNTV FRTNLTGPWL VSKYVCSLMR DAKGGGSVIN VSSIAGLHRG LLPGGVAYAC SKGGVDTMTR MMAIELGVYN
201: IRVNSIAPGL LKSEITQGLM QKEWLKNVTE RSIPLKVQQT VDPGLTSLVR YLIHDSSRYV SGNTYILDSG ATIPGLPIFS SL
101: GKIDVLINNA GIRGNVKTSL DLTEDEWNTV FRTNLTGPWL VSKYVCSLMR DAKGGGSVIN VSSIAGLHRG LLPGGVAYAC SKGGVDTMTR MMAIELGVYN
201: IRVNSIAPGL LKSEITQGLM QKEWLKNVTE RSIPLKVQQT VDPGLTSLVR YLIHDSSRYV SGNTYILDSG ATIPGLPIFS SL
001: MSNHQTQVLK LLEPWCELKD KVVLVTGASS GIGREICLDL AKAGCQVIAA ARRVDRLNSL CSEINSFSST GIQAAALELD VSSDAATIQK AVREAWDIFG
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.