Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 2
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY48725 | Canola | cytosol, peroxisome, plastid | 42.86 | 24.04 |
| CDY03343 | Canola | cytosol, nucleus, peroxisome | 40.37 | 23.21 |
| CDY02920 | Canola | cytosol | 32.92 | 22.36 |
| CDY29203 | Canola | cytosol | 37.27 | 21.58 |
| PGSC0003DMT400096536 | Potato | cytosol, nucleus, peroxisome | 30.43 | 21.3 |
| CDY07814 | Canola | cytosol | 36.65 | 21.22 |
| CDX73333 | Canola | cytosol, nucleus, peroxisome | 34.78 | 20.0 |
| CDX76107 | Canola | cytosol, nucleus, peroxisome | 34.78 | 20.0 |
| CDY44938 | Canola | cytosol, peroxisome, plastid | 34.78 | 19.72 |
| CDY40209 | Canola | peroxisome | 36.02 | 18.59 |
| PGSC0003DMT400092434 | Potato | cytosol, nucleus, peroxisome | 31.06 | 18.52 |
| CDY65313 | Canola | cytosol, nucleus, peroxisome | 32.3 | 18.44 |
| PGSC0003DMT400036569 | Potato | nucleus, peroxisome, plastid | 30.43 | 18.08 |
| Solyc12g045030.1.1 | Tomato | nucleus | 30.43 | 18.08 |
| Solyc12g044940.1.1 | Tomato | nucleus | 30.43 | 18.08 |
| PGSC0003DMT400030315 | Potato | nucleus, peroxisome, plastid | 30.43 | 18.08 |
| PGSC0003DMT400083885 | Potato | nucleus, peroxisome, plastid | 30.43 | 18.08 |
| PGSC0003DMT400030316 | Potato | nucleus, peroxisome, plastid | 29.81 | 17.78 |
| Solyc10g080890.1.1 | Tomato | cytosol | 31.68 | 17.59 |
| VIT_08s0040g01200.t01 | Wine grape | cytosol | 30.43 | 17.13 |
| PGSC0003DMT400072205 | Potato | cytosol | 30.43 | 16.9 |
| EES14264 | Sorghum | cytosol, plastid | 29.19 | 16.85 |
| VIT_08s0040g01190.t01 | Wine grape | cytosol | 29.81 | 16.78 |
| PGSC0003DMT400088158 | Potato | cytosol | 26.71 | 16.73 |
| TraesCS2A01G528100.1 | Wheat | cytosol, peroxisome, plastid | 28.57 | 16.49 |
| Solyc10g080900.1.1 | Tomato | plastid | 29.19 | 16.38 |
| KRH71621 | Soybean | cytosol | 28.57 | 16.31 |
| Solyc10g006860.2.1 | Tomato | plastid | 27.95 | 16.3 |
| Solyc12g100220.1.1 | Tomato | plastid | 27.33 | 16.24 |
| Os08t0510400-01 | Rice | plastid | 28.57 | 16.2 |
| PGSC0003DMT400061270 | Potato | cytosol, nucleus, peroxisome | 27.33 | 16.18 |
| KRH71588 | Soybean | cytosol | 27.95 | 15.96 |
| VIT_08s0040g01210.t01 | Wine grape | cytosol | 27.95 | 15.9 |
| TraesCS7D01G245700.1 | Wheat | cytosol | 27.95 | 15.9 |
| Zm00001d031453_P001 | Maize | cytosol | 27.33 | 15.71 |
| TraesCS7B01G144400.1 | Wheat | cytosol | 27.33 | 15.55 |
| TraesCS7A01G246900.1 | Wheat | plastid | 27.33 | 15.55 |
| TraesCS7A01G427800.1 | Wheat | mitochondrion | 26.71 | 15.41 |
| TraesCS2D01G531000.1 | Wheat | plastid | 26.71 | 15.41 |
| HORVU7Hr1G050760.2 | Barley | vacuole | 28.57 | 14.74 |
| HORVU2Hr1G116450.1 | Barley | plastid | 27.33 | 13.88 |
| CDX73391 | Canola | cytosol | 35.4 | 12.15 |
| Solyc12g036510.1.1 | Tomato | cytosol | 11.18 | 7.63 |
| CDY02527 | Canola | cytosol | 9.94 | 6.08 |
| CDY65036 | Canola | cytosol | 9.94 | 6.08 |
| CDX69242 | Canola | cytosol, nucleus, plasma membrane, plastid | 6.83 | 4.51 |
| GSMUA_Achr3P03770_001 | Banana | cytosol | 0.0 | 0.0 |
| KRH76339 | Soybean | cytosol | 0.0 | 0.0 |
| CDY29207 | Canola | plastid | 0.0 | 0.0 |
| CDY07809 | Canola | plastid | 0.0 | 0.0 |
| PGSC0003DMT400036566 | Potato | cytosol, extracellular, nucleus | 0.0 | 0.0 |
| PGSC0003DMT400062814 | Potato | cytosol | 0.0 | 0.0 |
| PGSC0003DMT400064364 | Potato | peroxisome, plastid, vacuole | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:CDX91138 | EnsemblPlantsGene:GSBRNA2T00151927001 | Gene3D:3.40.50.720 | GO:A0A078DVA6 | InterPro:NAD(P)-bd_dom_sf | InterPro:SDR_fam |
| PANTHER:PTHR44375 | PANTHER:PTHR44375:SF1 | PFAM:PF00106 | ProteinID:CDX91138 | ProteinID:CDX91138.1 | SEG:seg |
| SUPFAM:SSF51735 | UniParc:UPI0004EE0845 | MapMan:35.2 | : | : | : |
Description
BnaC02g04590D
Coordinates
chrLK031865:+:943838..944572
Molecular Weight (calculated)
16825.0 Da
IEP (calculated)
4.895
GRAVY (calculated)
0.131
Length
161 amino acids
Sequence
(BLAST)
(BLAST)
001: MEETYLEDTC WQITFSFLSF SSNPSSLPPP SPINAGESVV AGTTGKAKKK AGGARDLRIL SPVLWSAIRA QSSNCVDEVG AMADLKDKVV LVTGASSGIG
101: KEICLDLVKA GCKIIAAAHR VDRLNSLCSN INSFGSTGTQ ATALELDVAS EAWEVFGLSS V
101: KEICLDLVKA GCKIIAAAHR VDRLNSLCSN INSFGSTGTQ ATALELDVAS EAWEVFGLSS V
001: MSNHQTKQVL KQLEPWCELK DKVVLVTGAS SGIGREICLD LCKAGCKIVA AARRVDRLNS LCSEINSFGA IGVQAAALEL DVSSDADTIR KAVKEAWEIF
101: GTIDVLINNA GIRGNVKSSL DLSKEEWDKV FRTNLTGSWL ISKYVCLLMR DAKRGGSVIN VSSISGLHRG LLRGGLAYAC SKGGVDTMTR MMAIELAVYK
201: IRVNSIAPGI FRSEITQGLF QKEWLEKVTE KIVPLKMQQT VDPGLTSLVR YLIHDSSQYV TGNTYIVDSG ATLPGVPIFS SL
101: GTIDVLINNA GIRGNVKSSL DLSKEEWDKV FRTNLTGSWL ISKYVCLLMR DAKRGGSVIN VSSISGLHRG LLRGGLAYAC SKGGVDTMTR MMAIELAVYK
201: IRVNSIAPGI FRSEITQGLF QKEWLEKVTE KIVPLKMQQT VDPGLTSLVR YLIHDSSQYV TGNTYIVDSG ATLPGVPIFS SL
Arabidopsis Description
NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4HYU6]
SUBAcon: [peroxisome,nucleus,cytosol]
SUBAcon: [peroxisome,nucleus,cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.