CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
mitochondrion 2
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	plastid
iPSORT:	mitochondrion
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRH44614
KRH47290

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G55290.1	KRH44614	AT1G51580.1	21798944
AT3G55290.1	KRH47290	AT1G51580.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400036566	Potato	cytosol, extracellular, nucleus	40.71	50.55
PGSC0003DMT400062814	Potato	cytosol	40.71	46.0
GSMUA_Achr3P03770_001	Banana	cytosol	23.01	45.61
PGSC0003DMT400064364	Potato	peroxisome, plastid, vacuole	46.02	38.52
CDY07809	Canola	plastid	45.13	34.46
CDY29207	Canola	plastid	44.25	33.78
Bra024488.1-P	Field mustard	plastid	44.25	33.78
KRH71621	Soybean	cytosol	61.06	24.47
PGSC0003DMT400096536	Potato	cytosol, nucleus, peroxisome	46.9	23.04
KRH71588	Soybean	cytosol	55.75	22.34
Bra014760.1-P	Field mustard	plastid	44.25	21.74
PGSC0003DMT400061270	Potato	cytosol, nucleus, peroxisome	47.79	19.85
AT3G55290.1	Thale cress	cytosol	48.67	19.64
PGSC0003DMT400092434	Potato	cytosol, nucleus, peroxisome	46.9	19.63
VIT_08s0040g01200.t01	Wine grape	cytosol	49.56	19.58
PGSC0003DMT400030315	Potato	nucleus, peroxisome, plastid	46.9	19.56
TraesCS2A01G528100.1	Wheat	cytosol, peroxisome, plastid	47.79	19.35
AT3G55310.1	Thale cress	cytosol	47.79	19.35
PGSC0003DMT400072205	Potato	cytosol	49.56	19.31
PGSC0003DMT400030316	Potato	nucleus, peroxisome, plastid	46.02	19.26
VIT_08s0040g01190.t01	Wine grape	cytosol	48.67	19.23
PGSC0003DMT400088158	Potato	cytosol	43.36	19.07
CDY03343	Canola	cytosol, nucleus, peroxisome	46.9	18.93
CDY48725	Canola	cytosol, peroxisome, plastid	47.79	18.82
Bra036706.1-P	Field mustard	cytosol	46.9	18.47
TraesCS2D01G531000.1	Wheat	plastid	45.13	18.28
EES14264	Sorghum	cytosol, plastid	45.13	18.28
CDX73333	Canola	cytosol, nucleus, peroxisome	45.13	18.21
Os08t0510400-01	Rice	plastid	45.13	17.96
CDY44938	Canola	cytosol, peroxisome, plastid	45.13	17.96
Zm00001d031453_P001	Maize	cytosol	44.25	17.86
Bra014757.1-P	Field mustard	cytosol	44.25	17.86
CDX76107	Canola	cytosol, nucleus, peroxisome	44.25	17.86
CDY65313	Canola	cytosol, nucleus, peroxisome	44.25	17.73
PGSC0003DMT400083885	Potato	nucleus, peroxisome, plastid	42.48	17.71
AT3G46170.1	Thale cress	cytosol, extracellular, peroxisome	45.13	17.71
AT1G62610.4	Thale cress	cytosol, nucleus, peroxisome	43.36	17.38
Bra002097.1-P	Field mustard	cytosol	42.48	17.27
TraesCS7A01G427800.1	Wheat	mitochondrion	42.48	17.2
Bra014762.1-P	Field mustard	cytosol	42.48	17.14
AT1G63380.2	Thale cress	cytosol	43.36	17.07
PGSC0003DMT400036569	Potato	nucleus, peroxisome, plastid	40.71	16.97
CDY07814	Canola	cytosol	41.59	16.91
CDY29203	Canola	cytosol	41.59	16.91
Bra040871.1-P	Field mustard	cytosol	41.59	16.91
AT2G17845.1	Thale cress	golgi, peroxisome, plastid	46.02	16.67
TraesCS7B01G144400.1	Wheat	cytosol	40.71	16.25
TraesCS7A01G246900.1	Wheat	plastid	40.71	16.25
TraesCS7D01G245700.1	Wheat	cytosol	40.71	16.25
VIT_08s0040g01210.t01	Wine grape	cytosol	40.71	16.25
Bra014761.1-P	Field mustard	cytosol	36.28	16.14
CDY40209	Canola	peroxisome	44.25	16.03
HORVU2Hr1G116450.1	Barley	plastid	44.25	15.77
HORVU7Hr1G050760.2	Barley	vacuole	40.71	14.74
CDY02920	Canola	cytosol	25.66	12.24
Bra007151.1-P	Field mustard	cytosol	45.13	11.38
CDX73391	Canola	cytosol	43.36	10.45
KRH03600	Soybean	cytosol	20.35	8.58
Solyc12g100280.1.1	Tomato	cytosol	0.88	0.78
CDX91138	Canola	cytosol, plastid	0.0	0.0

Protein Annotations

EMBL:ACUP02000607	EnsemblPlants:KRH76339	EnsemblPlantsGene:GLYMA_01G147100	Gene3D:3.40.50.720	InterPro:NAD(P)-bd_dom_sf	PANTHER:PTHR44375
PANTHER:PTHR44375:SF2	PFAM:PF13561	ProteinID:KRH76339	ProteinID:KRH76339.1	SUPFAM:SSF51735	UniParc:UPI00023BED14
UniProt:I1J812	MapMan:35.2	:	:	:	:

Description

hypothetical protein

Coordinates

chr1:+:48359035..48359376

Molecular Weight (calculated)

13030.8 Da

IEP (calculated)

9.678

GRAVY (calculated)

-0.228

Length

113 amino acids

Sequence
(BLAST)

001: MALEMGTHKI RVNSISPLLF KSEITANLMQ KHWLNDVAMK TVPLRKYDTS DPALTSLARY LIHDSSEYVS GNNFVLWTLE PPYQVRLFIP PYKQRVSSAL
101: YNVGLELNNS FRQ

Best Arabidopsis Sequence Match ( AT3G55290.1 )
(BLAST)

001: MSNHQTQVLK LLEPWCELKD KVVLVTGASS GIGREICLDL AKAGCQVIAA ARRVDRLNSL CSEINSFSST GIQAAALELD VSSDAATIQK AVREAWDIFG
101: KIDALINNAG IRGNVKSSLD LSEDEWDNVF KTNLKGPWLV SKHVCMLMRD AKRGGSVINI SSIAGIRGML PGGLAYACSK GGVDTMSRMM ALELGVHKIR
201: VNSIAPGLFK SEITQGLMQK EWLKNVTERT VPLKVQQTVD PGLTSLVRYL IHDSSQYISG NTYIVDSGAT LPGVPIFSSL

Arabidopsis Description

NAD(P)-binding Rossmann-fold superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q94AL3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.